WRF.exe run aborted in the middle of the job

Having problems running the WRF Preprocessing System (WPS)?

WRF.exe run aborted in the middle of the job

Postby Pramodadhikari » Thu Jul 02, 2020 3:24 pm

Hi,
I am running 30 hours (2015-07-03_15 to 2015-07-04-21) of WRF run in Cheyenne HPC but gets aborted each time at around 21st hour (2015-07-04-12:10). The wrfout files are produced every three hourly till 2015-07-04-12. It does not show any fatal error. The error message it shows is: "MPT ERROR: MPI_COMM_WORLD rank 53 has terminated without calling MPI_Finalize() aborting job". I tried to re-run it with a different date and the same error occurs.

When I ran it for 6 hours (2015-07-04_09 to 2015-07-04-15), the WRF run was successful.
I talked to Cheyenne people and they said it is not the system problem. I am a new user and could not figure out what exactly the error is. Can you please help me out.

Thank you in advance.

WRF version: WRFV4.1.5 with Chemistry
Meteorological BC: ERA5
domain size: 3km 378x333

Namelist.input

run_days = 0,
run_hours = 30,
run_minutes = 0,
run_seconds = 0,
start_year = 2015, 2015, 2019,
start_month = 07, 07, 02,
start_day = 03, 03, 12,
start_hour = 15, 15, 00,
start_minute = 00, 00, 00,
start_second = 00, 00, 00,
end_year = 2015, 2015, 2019,
end_month = 07, 07, 02,
end_day = 04, 05, 17,
end_hour = 21, 00, 00,
end_minute = 00, 00, 00,
end_second = 00, 00, 00,
interval_seconds = 10800
input_from_file = .true.,.true.,.true.,
history_interval = 180, 180, 60,
frames_per_outfile = 1, 1, 24,
restart = .false.,
restart_interval = 5000,
auxinput4_inname = "wrflowinp_d<domain>",
auxinput4_interval = 180, 180, 180,
io_form_auxinput4 = 2,
io_form_history = 2,
io_form_restart = 2,
io_form_input = 2,
io_form_boundary = 2,
auxinput5_interval_m = 86400,
auxinput7_interval_m = 86400,
auxinput8_interval_m = 86400,
io_form_auxinput2 = 2,
io_form_auxinput5 = 0,
io_form_auxinput6 = 0,
io_form_auxinput7 = 0,
io_form_auxinput8 = 0
io_form_auxinput12 = 0,
debug_level = 1000,
auxinput1_inname = "met_em.d<domain>.<date>",
/

&domains
time_step = 18,
use_adaptive_time_step = .true.,
step_to_output_time = .true.,
target_cfl = 1.2, 1.2, 1.2,
starting_time_step = -1, -1, -1,
max_time_step = 54, 18, 12,
min_time_step = -1, -1, -1,
time_step_fract_num = 0,
time_step_fract_den = 1,
max_dom = 1,
s_we = 1, 1, 1,
e_we = 378, 352, 103,
s_sn = 1, 1, 1,
e_sn = 333, 238, 106,
s_vert = 1, 1, 1,
e_vert = 71, 71, 51,
num_metgrid_levels = 38,
dx = 3000, 3000, 3000,
dy = 3000, 3000, 3000,
grid_id = 1, 2, 3,
parent_id = 1, 1, 2,
i_parent_start = 1, 52, 48,
j_parent_start = 1, 60, 31,
parent_grid_ratio = 1, 3, 3,
parent_time_step_ratio = 1, 3, 3,
feedback = 0,
smooth_option = 0,
p_top_requested = 5000,

/
&physics
mp_physics = 10, 10, 8,
mp_zero_out_thresh = 1.e-12
ra_lw_physics = 4, 4, 1,
ra_sw_physics = 4, 4, 1,
radt = 3, 5, 5,
sf_sfclay_physics = 1, 5, 7,
sf_surface_physics = 5, 2, 5,
bl_pbl_physics = 1, 5, 7,
bldt = 0, 0, 0,
cu_physics = 0, 0, 0,
cudt = 5, 5, 5,
isfflx = 1,
ifsnow = 1,
icloud = 1,
cu_diag = 1,
cugd_avedx = 3,
surface_input_source = 1,
num_soil_layers = 4,
sf_urban_physics = 0, 0, 0,
sst_update = 1,
num_land_cat = 21,
cu_rad_feedback =.true.,
maxiens=1,
maxens=3,
maxens2=3,
maxens3=16,
ensdim=144,
/

&dynamics
rk_ord = 3,
w_damping = 1,
diff_opt = 1, 1, 1,
km_opt = 4, 4, 4,
diff_6th_opt = 0, 0, 0,
diff_6th_factor = 0.12, 0.12, 0.12,
base_temp = 290.
damp_opt = 1,
zdamp = 5000., 5000., 5000.,
dampcoef = 0.2, 0.2, 0.2
epssm = 0.3, 0.3, 0.3
gwd_opt = 1,
khdif = 0, 0, 0,
kvdif = 0, 0, 0,
non_hydrostatic = .true., .true., .true.,
moist_adv_opt = 2, 2, 1,
scalar_adv_opt = 2, 2, 1,
chem_adv_opt = 2, 2, 1,
tke_adv_opt = 2, 2, 1,
time_step_sound = 4, 4, 4,
h_mom_adv_order = 5, 5, 5,
v_mom_adv_order = 3, 3, 3,
h_sca_adv_order = 5, 3, 3,
v_sca_adv_order = 3, 3, 3,
etac = 0.1
/

&bdy_control
spec_bdy_width = 15,
spec_zone = 1,
relax_zone = 14,
specified = .true., .false.,.false.,
nested = .false., .true., .true.,
/
&grib2
/
&namelist_quilt
nio_tasks_per_group = 0,
nio_groups = 1,
Pramodadhikari
 
Posts: 1
Joined: Thu Jul 02, 2020 2:50 pm

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