real.exe problem.

Any issues with the actual running of the WRF.

real.exe problem.

Postby sunferia@gmail.com » Thu Oct 27, 2016 10:44 pm

when i check real.exe as below:
~/Build_WRF/WRFV3/run$ tail rsl.error.0000
ims,ime,jms,jme -4 79 -4 66
ips,ipe,jps,jpe 1 74 1 61
*************************************
DYNAMICS OPTION: Eulerian Mass Coordinate
alloc_space_field: domain 1 , 144373944 bytes allocated
-------------- FATAL CALLED ---------------
FATAL CALLED FROM FILE: <stdin> LINE: 413
error opening met_em.d01.2006-12-19_12:00:00.nc for input; bad date in namelist or file not in directory
-------------------------------------------
application called MPI_Abort(MPI_COMM_WORLD, 1) - process 0

namelist input:

&time_control
run_days = 1,
run_hours = 24,
run_minutes = 0,
run_seconds = 0,
start_year = 2006, 2006, 2006,
start_month = 12, 12, 12,
start_day = 19, 19, 19,
start_hour = 12, 12, 12,
start_minute = 00, 00, 00,
start_second = 00, 00, 00,
end_year = 2006, 2006, 2006,
end_month = 12, 12, 12,
end_day = 20, 20, 20,
end_hour = 12, 12, 12,
end_minute = 00, 00, 00,
end_second = 00, 00, 00,
interval_seconds = 10800
input_from_file = .true.,.false.,.false.,
history_interval = 180, 60, 60,
frames_per_outfile = 1000, 1000, 1000,
restart = .false.,
restart_interval = 5000,
io_form_history = 2
io_form_restart = 2
io_form_input = 2
io_form_boundary = 2
debug_level = 0
/

&domains
time_step = 180,
time_step_fract_num = 0,
time_step_fract_den = 1,
max_dom = 1,
s_we = 1, 1, 1,
e_we = 74, 112, 94,
s_sn = 1, 1, 1,
e_sn = 61, 97, 91,
s_vert = 1, 1, 1,
e_vert = 30, 30, 30,
p_top_requested = 5000,
num_metgrid_levels = 27,
num_metgrid_soil_levels = 4,
dx = 30000, 10000, 3333.33,
dy = 30000, 10000, 3333.33,
grid_id = 1, 2, 3,
parent_id = 1, 1, 2,
i_parent_start = 1, 31, 30,
j_parent_start = 1, 17, 30,
parent_grid_ratio = 1, 3, 3,
parent_time_step_ratio = 1, 3, 3,
feedback = 1,
smooth_option = 0
/

&physics
mp_physics = 3, 3, 3,
ra_lw_physics = 1, 1, 1,
ra_sw_physics = 1, 1, 1,
radt = 30, 30, 30,
sf_sfclay_physics = 1, 1, 1,
sf_surface_physics = 1, 1, 1,
bl_pbl_physics = 1, 1, 1,
bldt = 0, 0, 0,
cu_physics = 1, 1, 0,
cudt = 5, 5, 5,
isfflx = 1,
ifsnow = 1,
icloud = 1,
surface_input_source = 3,
num_soil_layers = 5,
num_land_cat = 21,
sf_urban_physics = 0, 0, 0,
/

&fdda
/

&dynamics
w_damping = 0,
diff_opt = 1, 1, 1,
km_opt = 4, 4, 4,
diff_6th_opt = 0, 0, 0,
diff_6th_factor = 0.12, 0.12, 0.12,
base_temp = 290.
damp_opt = 0,
zdamp = 5000., 5000., 5000.,
dampcoef = 0.2, 0.2, 0.2
khdif = 0, 0, 0,
kvdif = 0, 0, 0,
non_hydrostatic = .true., .true., .true.,
moist_adv_opt = 1, 1, 1,
scalar_adv_opt = 1, 1, 1,
/

&bdy_control
spec_bdy_width = 5,
spec_zone = 1,
relax_zone = 4,
specified = .true., .false.,.false.,
nested = .false., .true., .true.,
/

&grib2
/

&namelist_quilt
nio_tasks_per_group = 0,
nio_groups = 1,
/

How can I make it out?

thanks ,
Sam
sunferia@gmail.com
 
Posts: 13
Joined: Thu Sep 29, 2016 11:11 pm

Re: real.exe problem.

Postby sunferia@gmail.com » Fri Oct 28, 2016 12:51 am

rsl.out.0000
taskid: 0 hostname: sam
Ntasks in X 1 , ntasks in Y 1
--- WARNING: traj_opt is zero, but num_traj is not zero; setting num_traj to zero.
--- NOTE: sst_update is 0, setting io_form_auxinput4 = 0 and auxinput4_interval = 0 for all domains
--- NOTE: grid_fdda is 0 for domain 1, setting gfdda interval and ending time to 0 for that domain.
--- NOTE: both grid_sfdda and pxlsm_soil_nudge are 0 for domain 1, setting sgfdda interval and ending time to 0 for that domain.
--- NOTE: obs_nudge_opt is 0 for domain 1, setting obs nudging interval and ending time to 0 for that domain.
--- NOTE: bl_pbl_physics /= 4, implies mfshconv must be 0, resetting
Need MYNN PBL for icloud_bl = 1, resetting to 0
--- NOTE: RRTMG radiation is not used, setting: o3input=0 to avoid data pre-processing
--- NOTE: num_soil_layers has been set to 5
REAL_EM V3.8 PREPROCESSOR
*************************************
Parent domain
ids,ide,jds,jde 1 74 1 61
ims,ime,jms,jme -4 79 -4 66
ips,ipe,jps,jpe 1 74 1 61
*************************************
DYNAMICS OPTION: Eulerian Mass Coordinate
alloc_space_field: domain 1 , 144373944 bytes allocated
Time period # 1 to process = 2006-12-19_12:00:00.
Time period # 2 to process = 2006-12-19_15:00:00.
Time period # 3 to process = 2006-12-19_18:00:00.
Time period # 4 to process = 2006-12-19_21:00:00.
Time period # 5 to process = 2006-12-20_00:00:00.
Time period # 6 to process = 2006-12-20_03:00:00.
Time period # 7 to process = 2006-12-20_06:00:00.
Time period # 8 to process = 2006-12-20_09:00:00.
Time period # 9 to process = 2006-12-20_12:00:00.
Total analysis times to input = 9.

-----------------------------------------------------------------------------

Domain 1: Current date being processed: 2006-12-19_12:00:00.0000, which is loop # 1 out of 9
configflags%julyr, %julday, %gmt: 2006 353 12.0000000
-------------- FATAL CALLED ---------------
FATAL CALLED FROM FILE: <stdin> LINE: 413
error opening met_em.d01.2006-12-19_12:00:00.nc for input; bad date in namelist or file not in directory
-------------------------------------------
sunferia@gmail.com
 
Posts: 13
Joined: Thu Sep 29, 2016 11:11 pm

Re: real.exe problem.

Postby sunferia@gmail.com » Fri Oct 28, 2016 1:28 am

after execute ./metgrid.exe ,I found error like this:

!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
! Successful completion of metgrid. !
!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!

Note: The following floating-point exceptions are signalling: IEEE_UNDERFLOW_FLAG IEEE_DENORMAL

How can I amend it.

Thanks
Sam
sunferia@gmail.com
 
Posts: 13
Joined: Thu Sep 29, 2016 11:11 pm

Re: real.exe problem.

Postby kwthomas » Fri Oct 28, 2016 5:44 pm

Hi Sam...

As a general rule, if the program runs to a normal completion, you can *ignore* the warnings.

I've seen similar in the CAPS realtime runs using our own ARPS software. Model output is fine.
Kevin W. Thomas
Center for Analysis and Prediction of Storms
University of Oklahoma
kwthomas
 
Posts: 168
Joined: Thu Aug 07, 2008 6:53 pm

Re: real.exe problem.

Postby sunferia@gmail.com » Sat Oct 29, 2016 3:17 am

and still error like this though changed data two times with NAM GFS docs.. and edit namelist wps and input,

-------------- FATAL CALLED ---------------
FATAL CALLED FROM FILE: <stdin> LINE: 413
error opening met_em.d01.2006-12-19_12:00:00.nc for input; bad date in namelist or file not in directory
-------------------------------------------
sunferia@gmail.com

Posts: 11
Joined: Thu Sep 29, 2016 11:11 pm

Do not know how to handle this.

Thanks

Sam
sunferia@gmail.com
 
Posts: 13
Joined: Thu Sep 29, 2016 11:11 pm

Re: real.exe problem.

Postby kwthomas » Tue Nov 01, 2016 4:14 pm

Make sure the file name really exists. Typos are easy in the ugly naming scheme.

Try setting "debug_level" to 9999 in the "namelist.input" file. Maybe something useful will get logged.

Also make sure that "io_form_auxinput1" is correct, probably 2 in your case.
Kevin W. Thomas
Center for Analysis and Prediction of Storms
University of Oklahoma
kwthomas
 
Posts: 168
Joined: Thu Aug 07, 2008 6:53 pm


Return to Runtime Problems

Who is online

Users browsing this forum: Bing [Bot] and 6 guests