real.exe error

Any issues with the actual running of the WRF.

real.exe error

Postby carinavb » Wed Aug 08, 2018 4:22 pm

Hello: I just finish the install of WRFV3.8, Everything went ok but I get an error when I execute real.exe.

sudo mpirun --allow-run-as-root -np 1 ./real.exe

I get this error:

tail rsl.error.0000
================
taskid: 0 hostname: MYHOSTNAME
module_io_quilt_old.F 2931 T
-------------- FATAL CALLED ---------------
FATAL CALLED FROM FILE: module_dm.b LINE: 1903
invalid parent id for domain 2
-------------------------------------------
application called MPI_Abort(MPI_COMM_WORLD, 1) - process 0

tail rsl.out.0000
==============
taskid: 0 hostname: carlosM
-------------- FATAL CALLED ---------------
FATAL CALLED FROM FILE: module_dm.b LINE: 1903
invalid parent id for domain 2
-------------------------------------------

namelist.wps
============
&share
wrf_core = 'ARW',
max_dom = 2,
start_date = '2018-08-09_00:00:00', '2018-08-09_00:00:00',
end_date = '2018-08-13_00:00:00', '2018-08-13_00:00:00',
interval_seconds = 21600,
io_form_geogrid = 2,
opt_output_from_geogrid_path = '/home/cmateos/WRF/domain/norte/',
debug_level = 0,
/

&geogrid
parent_id = 1,1,
parent_grid_ratio = 1,3,
i_parent_start = 1,14,
j_parent_start = 1,17,
e_we = 100,88,
e_sn = 78,112,
geog_data_res = '10m','30s',
dx = 3800,
dy = 3800,
map_proj = 'mercator',
ref_lat = -23.944
ref_lon = -64.278
truelat1 = -23.944
truelat2 = 0,
stand_lon = -64.278
geog_data_path = '/home/cmateos/WRF/geog',
opt_geogrid_tbl_path = '/home/cmateos/WRF/domain/norte/',
ref_x = 50.0,
ref_y = 39.0,
/

&ungrib
out_format = 'WPS',
prefix = 'FILE',
/

&metgrid
fg_name = 'FILE',
io_form_metgrid = 2,
opt_output_from_metgrid_path = '/home/cmateos/WRF/domain/norte/',
opt_metgrid_tbl_path = '/home/cmateos/WRF/domain/norte/',
/

&mod_levs
press_pa = 201300 , 200100 , 100000 ,
95000 , 90000 ,
85000 , 80000 ,
75000 , 70000 ,
65000 , 60000 ,
55000 , 50000 ,
45000 , 40000 ,
35000 , 30000 ,
25000 , 20000 ,
15000 , 10000 ,
5000 , 1000
/


&domain_wizard
grib_data_path = '/home/cmateos/WRF/GRIB',
grib_vtable = 'Vtable.GFS',
dwiz_name =norte
dwiz_desc =Jujuy Norte
dwiz_user_rect_x1 =1281
dwiz_user_rect_y1 =1267
dwiz_user_rect_x2 =1324
dwiz_user_rect_y2 =1297
dwiz_show_political =true
dwiz_center_over_gmt =true
dwiz_latlon_space_in_deg =10
dwiz_latlon_linecolor =-8355712
dwiz_map_scale_pct =25.0
dwiz_map_vert_scrollbar_pos =0
dwiz_map_horiz_scrollbar_pos =0
dwiz_gridpt_dist_km =3.8
dwiz_mpi_command =
dwiz_tcvitals =null
dwiz_bigmap =Y
/


namelist.input
=============
&time_control
run_days = 0,
run_hours = 12,
run_minutes = 0,
run_seconds = 0,
start_year = 2018, 2018,
start_month = 08, 08,
start_day = 09, 09,
start_hour = 00, 00,
start_minute = 00, 00,
start_second = 00, 00,
end_year = 2018, 2018,
end_month = 08, 08,
end_day = 13, 13,
end_hour = 00, 00,
end_minute = 00, 00,
end_second = 00, 00,
interval_seconds = 10800,
input_from_file = .true., .true.,
history_interval = 60, 60,
frames_per_outfile = 1, 1,
restart = .false.,
restart_interval = 5000,
io_form_history = 2,
io_form_restart = 2,
io_form_input = 2,
io_form_boundary = 2,
debug_level = 0,
/

&domains
time_step = 23,
time_step_fract_num = 0,
time_step_fract_den = 1,
max_dom = 2,
e_we = 100, 88,
e_sn = 78, 64,
e_vert = 35, 35,
p_top_requested = 5000,
num_metgrid_levels = 40,
num_metgrid_soil_levels = 4,
dx = 3800, 1266.667,
dy = 3800, 1266.667,
grid_id = 1, 2,
parent_id = 1, 1,
i_parent_start = 1, 36,
j_parent_start = 1, 29,
parent_grid_ratio = 1, 3,
parent_time_step_ratio = 1, 3,
feedback = 1,
smooth_option = 0,
/

&physics
mp_physics = 6, 6,
ra_lw_physics = 1, 1,
ra_sw_physics = 1, 1,
radt = 10, 10,
sf_sfclay_physics = 1, 1,
sf_surface_physics = 2, 2,
bl_pbl_physics = 1, 1,
bldt = 0, 0,
cu_physics = 0, 0,
cudt = 5, 5,
isfflx = 1,
ifsnow = 0,
icloud = 1,
surface_input_source = 1,
num_soil_layers = 4,
sf_urban_physics = 0, 0,
maxiens = 1,
maxens = 3,
maxens2 = 3,
maxens3 = 16,
ensdim = 144,
/

&fdda
/

&dynamics
w_damping = 0,
diff_opt = 1,
km_opt = 4,
diff_6th_opt = 0, 0,
diff_6th_factor = 0.12, 0.12,
base_temp = 290.,
damp_opt = 0,
zdamp = 5000., 5000.,
dampcoef = 0.2, 0.2,
khdif = 0, 0,
kvdif = 0, 0,
non_hydrostatic = .true., .true.,
moist_adv_opt = 1, 1,
scalar_adv_opt = 1, 1,
/

&bdy_control
spec_bdy_width = 5,
spec_zone = 1,
relax_zone = 4,
specified = .true., .false.,
nested = .false., .true.,
/

&grib2
/

&namelist_quilt
nio_tasks_per_group = 0,
nio_groups = 1,
/



Hope someone can guide me to resolve this.
Best regards.
carinavb
 
Posts: 32
Joined: Wed Jun 23, 2010 4:05 pm

Re: real.exe error

Postby dcvz » Sat Aug 11, 2018 1:40 am

i_parent_start, j_parent_start, and e_sn are different in the two namelists. They need to be the same. More accurately, the values in namelist.input must match the values in the geogrid files.

If you still get an error, try setting debug_level=1000 to get more printout. (Set it back to 0 when you get it working).
dcvz
 
Posts: 176
Joined: Tue Apr 15, 2008 12:02 am


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