WPS V 3.9.1 > metgrid.exe and geogrid.exe cannot be compiled

All things involving the setup (compiling, NetCDF, etc.) of the WRF Model itself.

WPS V 3.9.1 > metgrid.exe and geogrid.exe cannot be compiled

Postby Bhavana Medisetti » Tue Oct 17, 2017 7:12 am

Hie,
I am trying to build WPSV 3.9.1 after compilation only ungrib.exe was formed ,no geogrid.exe and metgrid,exe. I have successfully compiled WRFV3.9.1.1, but I have problem compiling geogrid.exe and metgrid.exe for WPS .Please help me

Compiling geogrid

**** Compiling geogrid ****

make[1]: Entering directory `/home/kshama/Build_WRF/WPS/geogrid/src'
mpif90 -f90=gfortran -o geogrid.exe cio.o wrf_debug.o bitarray_module.o constants_module.o module_stringutil.o geogrid.o gridinfo_module.o hash_module.o interp_module.o list_module.o llxy_module.o misc_definitions_module.o module_debug.o module_map_utils.o output_module.o parallel_module.o process_tile_module.o proc_point_module.o queue_module.o read_geogrid.o smooth_module.o source_data_module.o \
/home/kshama/Build_WRF/WPS/../WRFV3/frame/module_driver_constants.o \
/home/kshama/Build_WRF/WPS/../WRFV3/frame/pack_utils.o /home/kshama/Build_WRF/WPS/../WRFV3/frame/module_machine.o \
/home/kshama/Build_WRF/WPS/../WRFV3/frame/module_internal_header_util.o \
-I/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf -I/home/kshama/Build_WRF/WPS/../WRFV3/external/io_grib_share -I/home/kshama/Build_WRF/WPS/../WRFV3/external/io_grib1 -I/home/kshama/Build_WRF/WPS/../WRFV3/external/io_int -I/home/kshama/Build_WRF/WPS/../WRFV3/inc -I/home/kshama/Build_WRF/LIBRARIES/netcdf-4.1.3/netcdf/include/include \
-L/home/kshama/Build_WRF/WPS/../WRFV3/external/io_grib1 -lio_grib1 -L/home/kshama/Build_WRF/WPS/../WRFV3/external/io_grib_share -lio_grib_share -L/home/kshama/Build_WRF/WPS/../WRFV3/external/io_int -lwrfio_int -L/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf -lwrfio_nf -L/home/kshama/Build_WRF/LIBRARIES/netcdf-4.1.3/netcdf/include/lib -lnetcdff -lnetcdf \

/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `__ext_ncd_support_routines_MOD_transpose._omp_fn.0':
wrf_io.f:(.text+0x77): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x463): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x470): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `__ext_ncd_support_routines_MOD_transpose._omp_fn.1':
wrf_io.f:(.text+0x517): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x901): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x90e): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `__ext_ncd_support_routines_MOD_transpose._omp_fn.2':
wrf_io.f:(.text+0x9b5): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0xd7b): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0xd88): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `__ext_ncd_support_routines_MOD_transpose._omp_fn.3':
wrf_io.f:(.text+0xe25): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x11e9): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x11f6): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `__ext_ncd_support_routines_MOD_transpose._omp_fn.4':
wrf_io.f:(.text+0x1295): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x1685): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x1692): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `__ext_ncd_support_routines_MOD_transpose._omp_fn.5':
wrf_io.f:(.text+0x1735): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x1b24): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x1b31): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `__ext_ncd_support_routines_MOD_transpose._omp_fn.6':
wrf_io.f:(.text+0x1bd5): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x1fd5): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x1fe2): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `__ext_ncd_support_routines_MOD_transpose._omp_fn.7':
wrf_io.f:(.text+0x2085): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x2483): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x2490): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `__ext_ncd_support_routines_MOD_transpose._omp_fn.8':
wrf_io.f:(.text+0x2535): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x2928): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x2935): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `__ext_ncd_support_routines_MOD_transpose._omp_fn.9':
wrf_io.f:(.text+0x29d5): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x2dc7): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x2dd4): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `__ext_ncd_support_routines_MOD_transpose._omp_fn.10':
wrf_io.f:(.text+0x2e75): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x326a): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x3277): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `__ext_ncd_support_routines_MOD_transpose._omp_fn.11':
wrf_io.f:(.text+0x3315): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x370a): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x3717): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `__ext_ncd_support_routines_MOD_transpose._omp_fn.12':
wrf_io.f:(.text+0x37b5): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x3ba5): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x3bb2): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `__ext_ncd_support_routines_MOD_transpose._omp_fn.13':
wrf_io.f:(.text+0x3c55): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x4044): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x4051): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `transposetor4_._omp_fn.14':
wrf_io.f:(.text+0x40f8): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x464d): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x465a): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `transposetor4_._omp_fn.15':
wrf_io.f:(.text+0x4703): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x4c21): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x4c33): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `transposetor4_._omp_fn.16':
wrf_io.f:(.text+0x4cd5): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x5204): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x5211): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `transposetor4_._omp_fn.17':
wrf_io.f:(.text+0x52b9): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x57a5): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x57b6): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `transposetor4_._omp_fn.18':
wrf_io.f:(.text+0x5855): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x5dac): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x5db9): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `transposetor4_._omp_fn.19':
wrf_io.f:(.text+0x5e59): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x636e): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x637f): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `transposetor4_._omp_fn.20':
wrf_io.f:(.text+0x6425): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x6983): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x6990): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `transposetor4_._omp_fn.21':
wrf_io.f:(.text+0x6a3f): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x6f5e): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x6f6f): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `transposetor4_._omp_fn.22':
wrf_io.f:(.text+0x7015): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x7566): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x7573): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `transposetor4_._omp_fn.23':
wrf_io.f:(.text+0x761f): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x7b39): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x7b4a): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `transposetor4_._omp_fn.24':
wrf_io.f:(.text+0x7be5): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x8144): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x8151): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `transposetor4_._omp_fn.25':
wrf_io.f:(.text+0x81f9): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x8716): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x8727): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `transposetor4_._omp_fn.26':
wrf_io.f:(.text+0x87c5): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x8d1c): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x8d29): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `transposetor4_._omp_fn.27':
wrf_io.f:(.text+0x8dc9): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x92de): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x92ef): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `__ext_ncd_support_routines_MOD_transpose':
wrf_io.f:(.text+0xa1a9): undefined reference to `GOMP_parallel'
wrf_io.f:(.text+0xa360): undefined reference to `GOMP_parallel'
wrf_io.f:(.text+0xa50d): undefined reference to `GOMP_parallel'
wrf_io.f:(.text+0xa6c0): undefined reference to `GOMP_parallel'
wrf_io.f:(.text+0xa86e): undefined reference to `GOMP_parallel'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o):wrf_io.f:(.text+0xaa1c): more undefined references to `GOMP_parallel' follow
collect2: error: ld returned 1 exit status
make[1]: [geogrid.exe] Error 1 (ignored)
make[1]: Leaving directory `/home/kshama/Build_WRF/WPS/geogrid/src'

**** Compiling metgrid ****

make[1]: Entering directory `/home/kshama/Build_WRF/WPS/metgrid/src'
mpif90 -f90=gfortran -o metgrid.exe cio.o wrf_debug.o bitarray_module.o constants_module.o datatype_module.o module_stringutil.o gridinfo_module.o metgrid.o input_module.o interp_module.o interp_option_module.o list_module.o llxy_module.o met_data_module.o minheap_module.o misc_definitions_module.o module_date_pack.o module_debug.o module_map_utils.o module_mergesort.o output_module.o parallel_module.o process_domain_module.o queue_module.o read_met_module.o rotate_winds_module.o storage_module.o write_met_module.o scan_input.o mpas_mesh.o target_mesh.o remapper.o \
/home/kshama/Build_WRF/WPS/../WRFV3/frame/module_driver_constants.o \
/home/kshama/Build_WRF/WPS/../WRFV3/frame/pack_utils.o /home/kshama/Build_WRF/WPS/../WRFV3/frame/module_machine.o \
/home/kshama/Build_WRF/WPS/../WRFV3/frame/module_internal_header_util.o \
-I/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf -I/home/kshama/Build_WRF/WPS/../WRFV3/external/io_grib_share -I/home/kshama/Build_WRF/WPS/../WRFV3/external/io_grib1 -I/home/kshama/Build_WRF/WPS/../WRFV3/external/io_int -I/home/kshama/Build_WRF/WPS/../WRFV3/inc -I/home/kshama/Build_WRF/LIBRARIES/netcdf-4.1.3/netcdf/include/include \
-L/home/kshama/Build_WRF/WPS/../WRFV3/external/io_grib1 -lio_grib1 -L/home/kshama/Build_WRF/WPS/../WRFV3/external/io_grib_share -lio_grib_share -L/home/kshama/Build_WRF/WPS/../WRFV3/external/io_int -lwrfio_int -L/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf -lwrfio_nf -L/home/kshama/Build_WRF/LIBRARIES/netcdf-4.1.3/netcdf/include/lib -lnetcdff -lnetcdf \

/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `__ext_ncd_support_routines_MOD_transpose._omp_fn.0':
wrf_io.f:(.text+0x77): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x463): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x470): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `__ext_ncd_support_routines_MOD_transpose._omp_fn.1':
wrf_io.f:(.text+0x517): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x901): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x90e): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `__ext_ncd_support_routines_MOD_transpose._omp_fn.2':
wrf_io.f:(.text+0x9b5): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0xd7b): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0xd88): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `__ext_ncd_support_routines_MOD_transpose._omp_fn.3':
wrf_io.f:(.text+0xe25): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x11e9): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x11f6): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `__ext_ncd_support_routines_MOD_transpose._omp_fn.4':
wrf_io.f:(.text+0x1295): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x1685): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x1692): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `__ext_ncd_support_routines_MOD_transpose._omp_fn.5':
wrf_io.f:(.text+0x1735): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x1b24): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x1b31): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `__ext_ncd_support_routines_MOD_transpose._omp_fn.6':
wrf_io.f:(.text+0x1bd5): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x1fd5): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x1fe2): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `__ext_ncd_support_routines_MOD_transpose._omp_fn.7':
wrf_io.f:(.text+0x2085): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x2483): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x2490): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `__ext_ncd_support_routines_MOD_transpose._omp_fn.8':
wrf_io.f:(.text+0x2535): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x2928): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x2935): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `__ext_ncd_support_routines_MOD_transpose._omp_fn.9':
wrf_io.f:(.text+0x29d5): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x2dc7): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x2dd4): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `__ext_ncd_support_routines_MOD_transpose._omp_fn.10':
wrf_io.f:(.text+0x2e75): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x326a): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x3277): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `__ext_ncd_support_routines_MOD_transpose._omp_fn.11':
wrf_io.f:(.text+0x3315): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x370a): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x3717): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `__ext_ncd_support_routines_MOD_transpose._omp_fn.12':
wrf_io.f:(.text+0x37b5): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x3ba5): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x3bb2): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `__ext_ncd_support_routines_MOD_transpose._omp_fn.13':
wrf_io.f:(.text+0x3c55): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x4044): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x4051): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `transposetor4_._omp_fn.14':
wrf_io.f:(.text+0x40f8): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x464d): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x465a): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `transposetor4_._omp_fn.15':
wrf_io.f:(.text+0x4703): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x4c21): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x4c33): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `transposetor4_._omp_fn.16':
wrf_io.f:(.text+0x4cd5): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x5204): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x5211): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `transposetor4_._omp_fn.17':
wrf_io.f:(.text+0x52b9): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x57a5): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x57b6): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `transposetor4_._omp_fn.18':
wrf_io.f:(.text+0x5855): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x5dac): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x5db9): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `transposetor4_._omp_fn.19':
wrf_io.f:(.text+0x5e59): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x636e): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x637f): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `transposetor4_._omp_fn.20':
wrf_io.f:(.text+0x6425): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x6983): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x6990): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `transposetor4_._omp_fn.21':
wrf_io.f:(.text+0x6a3f): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x6f5e): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x6f6f): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `transposetor4_._omp_fn.22':
wrf_io.f:(.text+0x7015): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x7566): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x7573): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `transposetor4_._omp_fn.23':
wrf_io.f:(.text+0x761f): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x7b39): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x7b4a): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `transposetor4_._omp_fn.24':
wrf_io.f:(.text+0x7be5): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x8144): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x8151): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `transposetor4_._omp_fn.25':
wrf_io.f:(.text+0x81f9): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x8716): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x8727): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `transposetor4_._omp_fn.26':
wrf_io.f:(.text+0x87c5): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x8d1c): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x8d29): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `transposetor4_._omp_fn.27':
wrf_io.f:(.text+0x8dc9): undefined reference to `GOMP_loop_runtime_start'
wrf_io.f:(.text+0x92de): undefined reference to `GOMP_loop_runtime_next'
wrf_io.f:(.text+0x92ef): undefined reference to `GOMP_loop_end_nowait'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o): In function `__ext_ncd_support_routines_MOD_transpose':
wrf_io.f:(.text+0xa1a9): undefined reference to `GOMP_parallel'
wrf_io.f:(.text+0xa360): undefined reference to `GOMP_parallel'
wrf_io.f:(.text+0xa50d): undefined reference to `GOMP_parallel'
wrf_io.f:(.text+0xa6c0): undefined reference to `GOMP_parallel'
wrf_io.f:(.text+0xa86e): undefined reference to `GOMP_parallel'
/home/kshama/Build_WRF/WPS/../WRFV3/external/io_netcdf/libwrfio_nf.a(wrf_io.o):wrf_io.f:(.text+0xaa1c): more undefined references to `GOMP_parallel' follow
collect2: error: ld returned 1 exit status
make[1]: [metgrid.exe] Error 1 (ignored)
make[1]: Leaving directory `/home/kshama/Build_WRF/WPS/metgrid/src'
Bhavana Medisetti
 
Posts: 8
Joined: Fri Sep 01, 2017 7:33 am

Re: WPS V 3.9.1 > metgrid.exe and geogrid.exe cannot be comp

Postby kwthomas » Tue Oct 17, 2017 4:08 pm

Hi...

Look earlier in the logfile for an error message. The errors you show are a consequence of an earlier error.
Kevin W. Thomas
Center for Analysis and Prediction of Storms
University of Oklahoma
kwthomas
 
Posts: 210
Joined: Thu Aug 07, 2008 6:53 pm

Re: WPS V 3.9.1 > metgrid.exe and geogrid.exe cannot be comp

Postby Bhavana Medisetti » Mon Oct 23, 2017 3:00 am

kwthomas wrote:Hi...

Look earlier in the logfile for an error message. The errors you show are a consequence of an earlier error.



Thank you Sir, I got the solution.
Bhavana Medisetti
 
Posts: 8
Joined: Fri Sep 01, 2017 7:33 am

Re: WPS V 3.9.1 > metgrid.exe and geogrid.exe cannot be comp

Postby mt_tech » Sun Jan 28, 2018 9:23 am

Bhavana Medisetti wrote:
kwthomas wrote:Hi...

Look earlier in the logfile for an error message. The errors you show are a consequence of an earlier error.



Thank you Sir, I got the solution.


Could you please share what you did to solve this problem ?
mt_tech
 
Posts: 3
Joined: Sun Jan 28, 2018 9:22 am

Re: WPS V 3.9.1 > metgrid.exe and geogrid.exe cannot be comp

Postby amiw » Tue Mar 20, 2018 2:23 pm

Hi,
I have the same problem, I have successfully compiled WRFV3.9.1.1, but when I have compiled WPSV3.9.1 only ungrib.exe was formed ,no geogrid.exe and metgrid,exe. I have followed this Online Tutorial http:
//www2.mmm.ucar.edu/wrf/OnLineTutorial/compilation_tutorial.php.
I have this:

make[1]: [Makefile:13: geogrid.exe] Error 1 (no tiene efecto)
make[1]: se sale del directorio '/home/modelo/WRF/Build_WRF/WPS/geogrid/src'
( cd src/ngl ; make -i -r DEV_TOP="/home/modelo/WRF/Build_WRF/WPS" CC="icc" FC="ifort" RANLIB="echo" all )
make[1]: se entra en el directorio '/home/modelo/WRF/Build_WRF/WPS/ungrib/src/ngl'
( cd w3 ; make -i -r DEV_TOP="/home/modelo/WRF/Build_WRF/WPS" all ; echo libw3.a )
make[2]: se entra en el directorio '/home/modelo/WRF/Build_WRF/WPS/ungrib/src/ngl/w3'
Makefile:44: atención: se anulan las instrucciones para el objetivo '.f.o'
/home/modelo/WRF/Build_WRF/WPS/configure.wps:101: atención: se ignoran las instrucciones viejas para el objetivo '.f.o'
Makefile:48: atención: se anulan las instrucciones para el objetivo '.c.o'
/home/modelo/WRF/Build_WRF/WPS/configure.wps:97: atención: se ignoran las instrucciones viejas para el objetivo '.c.o'
/bin/rm -f bacio_module.o
ifort -FI -convert big_endian -c bacio_module.f
/bin/rm -f getgb.o
ifort -FI -convert big_endian -c getgb.f
/bin/rm -f getgbmh.o
ifort -FI -convert big_endian -c getgbmh.f
/bin/rm -f putgbex.o
ifort -FI -convert big_endian -c putgbex.f
/bin/rm -f w3fi73.o
ifort -FI -convert big_endian -c w3fi73.f
/bin/rm -f getgb1r.o
ifort -FI -convert big_endian -c getgb1r.f
/bin/rm -f getgbmp.o
ifort -FI -convert big_endian -c getgbmp.f
/bin/rm -f putgbn.o
ifort -FI -convert big_endian -c putgbn.f
/bin/rm -f w3fi74.o
ifort -FI -convert big_endian -c w3fi74.f
/bin/rm -f getgb1re.o
ifort -FI -convert big_endian -c getgb1re.f
....
make[1]: [Makefile:13: metgrid.exe] Error 1 (no tiene efecto)
make[1]: se sale del directorio '/home/modelo/WRF/Build_WRF/WPS/metgrid/src'
( cd src/ngl ; make -i -r DEV_TOP="/home/modelo/WRF/Build_WRF/WPS" CC="icc" FC="ifort" RANLIB="echo" all )
make[1]: se entra en el directorio '/home/modelo/WRF/Build_WRF/WPS/ungrib/src/ngl'
make[1]: No se hace nada para 'all'.
make[1]: se sale del directorio '/home/modelo/WRF/Build_WRF/WPS/ungrib/src/ngl'
( cd src ; \
if [ "" = yes ] ; then \
WRF_DIR2=../WRFV3 ; \
else \
WRF_DIR2=/home/modelo/WRF/Build_WRF/WPS/../WRFV3 ; \
fi ; \
make -i -r g1print.exe \
WRF_DIR="$WRF_DIR2" \
FC="ifort" \
CC="mpicc -cc=icc" \
CPP="/lib/cpp -P -traditional" \
FFLAGS="-FR -convert big_endian" \
CFLAGS="-w" \
LDFLAGS="" \
CPPFLAGS="-D_UNDERSCORE -DBYTESWAP -DLINUX -DIO_NETCDF -DIO_BINARY -DIO_GRIB1 -DBIT32 -D_MPI -D_GRIBUTIL" )
make[1]: se entra en el directorio '/home/modelo/WRF/Build_WRF/WPS/ungrib/src'
Makefile:90: atención: se anulan las instrucciones para el objetivo '.F.o'
../../configure.wps:105: atención: se ignoran las instrucciones viejas para el objetivo '.F.o'
Makefile:95: atención: se anulan las instrucciones para el objetivo '.c.o'
../../configure.wps:97: atención: se ignoran las instrucciones viejas para el objetivo '.c.o'
/lib/cpp -P -traditional -D_UNDERSCORE -DBYTESWAP -DLINUX -DIO_NETCDF -DIO_BINARY -DIO_GRIB1 -DBIT32 -D_MPI -D_GRIBUTIL -DUSE_JPEG2000 -DUSE_PNG g1print.F > g1print.f90
ifort -c -FR -convert big_endian g1print.f90
ifort -o g1print.exe g1print.o gribcode.o module_debug.o debug_cio.o libpgu.a
make[1]: se sale del directorio '/home/modelo/WRF/Build_WRF/WPS/ungrib/src'
...
I have installed libpng 1.6.31, I don't know if I have to use another version, also I have installed Intel compilers (version is 18.0.1 20171018). I have installed WRF and WPS in dmpar mode.

Thanks in advanced.
amiw
 
Posts: 2
Joined: Thu Mar 30, 2017 1:04 pm


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