Installing WRF - CentOS 6.7 (getting errors on compilation)

All things involving the setup (compiling, NetCDF, etc.) of the WRF Model itself.

Installing WRF - CentOS 6.7 (getting errors on compilation)

Postby steeve88 » Tue Apr 02, 2019 6:38 am

Hello all,

I am trying to install WRF on CentOS 6.7, but I get some errors when compiling wrf. Should say that I am a beginner user. I am going to comprehensively descibe what I am doing until the point that I get the errors:

As I am working on an institute server, I load the following modules:
gcc/7.2.0
openmpi/3.0.0
netcdf/4.4.1.1
netcdf-fortran/4.4.4
zlib/1.2.11
hdf5/1.10.1

Then:

export WRFIO_NCD_LARGE_FILE_SUPPORT=1
export NETCDF=/usr
export NETCDFPATH="/usr/lib64"
export MPI_LIB=/usr/lib64/openmpi/lib

and ./configure using the option 34 (dmpar, GNU, gfortran, gcc) and the basic nesting option 1. It seems that the configuration is successful. Next, in the configure.wrf I edit in order to get the following line:

LIB_EXTERNAL = \
-L$(WRF_SRC_ROOT_DIR)/external/io_netcdf -lwrfio_nf -L/usr/lib64 -lnetcdf -lnetcdff

and then, ./compile em_real >&compile_out&

So at this point I get errors when grep Error compile_out

Fatal Error: Cannot read module file ‘module_ext_internal.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[3]: [diffwrf] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_state_description.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [module_quilt_outbuf_ops.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_utility.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [module_domain_type.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_state_description.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [module_configure.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_domain_type.mod’ opened at (1), because it was created by a different version of GNU Fortran
Fatal Error: Cannot read module file ‘module_domain_type.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [module_alloc_space_0.o] Error 1 (ignored)
make[2]: [module_alloc_space_1.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_domain_type.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [module_alloc_space_3.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_domain_type.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [module_alloc_space_2.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_domain_type.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [module_alloc_space_4.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_domain_type.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [module_alloc_space_5.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_domain_type.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [module_alloc_space_6.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_domain_type.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [module_alloc_space_7.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_domain_type.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [module_alloc_space_8.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_domain_type.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [module_alloc_space_9.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_configure.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [nl_get_0_routines.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_configure.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [nl_get_1_routines.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_configure.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [nl_get_2_routines.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_configure.mod’ opened at (1), because it was created by a different version of GNU Fortran
Fatal Error: Cannot read module file ‘module_configure.mod’ opened at (1), because it was created by a different version of GNU Fortran
0.01system 0:00.05elamake[2]: p[nl_get_3_routines.o] Error 1 (ignored)
make[2]: [nl_get_4_routines.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_configure.mod’ opened at (1), because it was created by a different version of GNU Fortran
Fatal Error: Cannot read module file ‘module_configure.mod’ opened at (1), because it was created by a different version of GNU Fortran
8outputs (make[2]: 0major+[nl_get_5_routines.o] Error 1 (ignored)
make[2]: [nl_get_6_routines.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_configure.mod’ opened at (1), because it was created by a different version of GNU Fortran
Fatal Error: Cannot read module file ‘module_configure.mod’ opened at (1), because it was created by a different version of GNU Fortran
0.01make[2]: [nl_get_7_routines.o] Error 1 (ignored)user 0.01s
make[2]: [nl_set_0_routines.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_configure.mod’ opened at (1), because it was created by a different version of GNU Fortran
Fatal Error: Cannot read module file ‘module_configure.mod’ opened at (1), because it was created by a different version of GNU Fortran
user 0.01system make[2]: 0:00.05elapsed [nl_set_1_routines.o] Error 1 (ignored)
make[2]: [nl_set_2_routines.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_configure.mod’ opened at (1), because it was created by a different version of GNU Fortran
Fatal Error: Cannot read module file ‘module_configure.mod’ opened at (1), because it was created by a different version of GNU Fortran
0avgtext+make[2]: 0[nl_set_3_routines.o] Error 1 (ignored)a
make[2]: [nl_set_4_routines.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_configure.mod’ opened at (1), because it was created by a different version of GNU Fortran
Fatal Error: Cannot read module file ‘module_configure.mod’ opened at (1), because it was created by a different version of GNU Fortran
8outputs (make[2]: 0major+[nl_set_5_routines.o] Error 1 (ignored)
make[2]: [nl_set_6_routines.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_configure.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [nl_set_7_routines.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_configure.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [module_domain.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_domain.mod’ opened at (1), because it was created by a different version of GNU Fortran
Fatal Error: Cannot read module file ‘module_domain.mod’ opened at (1), because it was created by a different version of GNU Fortran
s (0major+make[2]: 3982minor)pagefaults [module_nesting.o] Error 1 (ignored)
make[2]: [module_cpl_oasis3.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_domain.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [module_comm_nesting_dm.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_domain.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [module_comm_dm_0.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_domain.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [module_comm_dm_1.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_domain.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [module_comm_dm_2.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_domain.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [module_comm_dm_3.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_configure.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [module_tiles.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_domain.mod’ opened at (1), because it was created by a different version of GNU Fortran
Fatal Error: Cannot read module file ‘module_domain.mod’ opened at (1), because it was created by a different version of GNU Fortran
[module_comm_dm_4.o] Error 1 (ignored)
make[2]: [module_clear_halos.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_comm_dm_0.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [module_comm_dm.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_domain.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [module_cpl.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_cpl.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [module_dm.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_domain.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [module_integrate.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_configure.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [module_io.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_internal_header_util.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [module_io_quilt.o] Error 1 (ignored)
make[2]: [framework] Error 1 (ignored)
make[2]: [framework] Error 1 (ignored)
Fatal Error: Cannot read module file ‘wrf_data.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [diffwrf] Error 1 (ignored)
make[2]: [diffwrf] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_ext_internal.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [diffwrf] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_state_description.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [../frame/module_configure.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_configure.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [../frame/module_domain.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_comm_dm_0.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [../frame/module_comm_dm.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_configure.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [module_date_time.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_domain.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [mediation_interp_domain.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_domain.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [mediation_force_domain.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_domain.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [mediation_feedback_domain.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_configure.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [module_bc.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_date_time.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [module_io_wrf.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_date_time.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [module_soil_pre.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_domain.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [wrf_tsin.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_domain.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [track_input.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_domain.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [../frame/module_nesting.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_cpl.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [../frame/module_dm.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_configure.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [../frame/module_tiles.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_configure.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [../frame/module_io.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_domain.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [set_timekeeping.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_configure.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [interp_fcn.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_io.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [wrf_ext_write_field.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_io.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [wrf_ext_read_field.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_io.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [module_io_domain.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_domain.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [wrf_fddaobs_in.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_domain.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [mediation_nest_move.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_domain.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [module_optional_input.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_domain.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [input_wrf.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_io.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [output_wrf.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_io.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [wrf_bdyout.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_domain.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [wrf_bdyin.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_domain.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [dfi.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_internal_header_util.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [../frame/module_io_quilt.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_domain.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [mediation_integrate.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_domain.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [mediation_wrfmain.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_state_description.mod’ opened at (1), because it was created by a different version of GNU Fortran
(0avgtext+make[2]: 0[module_check_a_mundo.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_domain.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [wrf_timeseries.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_state_description.mod’ opened at (1), because it was created by a different version of GNU Fortran
Fatal Error: Cannot read module file ‘module_domain.mod’ opened at (1), because it was created by a different version of GNU Fortran
[track_driver.o] Error 1 (ignored)
make[2]: [module_trajectory.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_bc.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [init_modules.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_domain.mod’ opened at (1), because it was created by a different version of GNU Fortran
Fatal Error: Cannot read module file ‘module_domain.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [solve_interface.o] Error 1 (ignored)
make[2]: [start_domain.o] Error 1 (ignored)
make[2]: [shared] Error 1 (ignored)
Fatal Error: Cannot read module file ‘shr_kind_mod.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[3]: [module_cam_constituents.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_cam_support.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[3]: [module_ra_cam_support.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_mp_radar.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[3]: [module_mp_thompson.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_comm_dm_0.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[3]: [../frame/module_comm_dm.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_configure.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[3]: [../frame/module_domain.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_state_description.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[3]: [../frame/module_configure.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_configure.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[3]: [../share/module_bc.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_utility.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[3]: [module_mp_lin.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_utility.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[3]: [module_mp_gsfcgce.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_configure.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[3]: [../share/module_date_time.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_cpl.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[3]: [../frame/module_dm.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_model_constants.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[3]: [module_sf_ruclsm.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_model_constants.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[3]: [module_sf_mynn.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_state_description.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[3]: [module_physics_addtendc.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_dm.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[3]: [module_fdda_spnudging.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_domain.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[3]: [module_fddaobs_driver.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_domain.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[3]: [../frame/module_cpl.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_dm.mod’ opened at (1), because it was created by a different version of GNU Fortran
Fatal Error: Cannot read module file ‘module_dm.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[3]: [module_diag_misc.o] Error 1 (ignored)
make[3]: [module_diag_cl.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_domain.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[3]: [module_diag_hailcast.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_domain.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[3]: [module_diag_afwa.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_cam_support.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[3]: [module_cam_molec_diff.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_fr_fire_model.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[3]: [module_fr_fire_driver.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘shr_kind_mod.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[3]: [module_cam_mp_ndrop.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘shr_kind_mod.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[3]: [module_bl_camuwpbl_driver.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘shr_kind_mod.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[3]: [module_cu_camzm.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_ra_cam_support.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[3]: [module_ra_cam.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_ra_clwrf_support.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[3]: [module_ra_rrtm.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_configure.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[3]: [module_ra_gfdleta.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_configure.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[3]: [module_ra_HWRF.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘shr_kind_mod.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[3]: [module_sf_clm.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_state_description.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[3]: [module_pbl_driver.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_state_description.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[3]: [module_surface_driver.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_configure.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[3]: [module_fddagd_driver.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_state_description.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[3]: [module_diagnostics_driver.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_fr_fire_driver.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[3]: [module_fr_fire_driver_wrf.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘shr_kind_mod.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[3]: [module_cam_mp_microp_aero.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_cam_support.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[3]: [module_shcu_camuwshcu.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘shr_kind_mod.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[3]: [module_mp_cammgmp_driver.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘shr_kind_mod.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[3]: [module_shcu_camuwshcu_driver.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_cam_support.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[3]: [module_cu_camzm_driver.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_model_constants.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[3]: [module_shallowcu_driver.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_state_description.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[3]: [module_radiation_driver.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_model_constants.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[3]: [module_mixactivate.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_state_description.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[3]: [module_cu_kfcup.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_state_description.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[3]: [module_microphysics_driver.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_state_description.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[3]: [module_physics_init.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_model_constants.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[3]: [module_cumulus_driver.o] Error 1 (ignored)
make[2]: [physics] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_configure.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [../share/module_bc.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_configure.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [../frame/module_domain.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_state_description.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [../frame/module_configure.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_model_constants.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [module_polarfft.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_state_description.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [../phys/module_radiation_driver.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_state_description.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [../phys/module_surface_driver.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_model_constants.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [../phys/module_cumulus_driver.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_model_constants.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [../phys/module_shallowcu_driver.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_state_description.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [../phys/module_pbl_driver.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_fr_fire_driver.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [../phys/module_fr_fire_driver_wrf.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_comm_dm_0.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [../frame/module_comm_dm.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_configure.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [../phys/module_fddagd_driver.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_configure.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [../frame/module_tiles.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_domain.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [../phys/module_fddaobs_driver.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_state_description.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [../phys/module_diagnostics_driver.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_domain.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [../frame/module_cpl.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_state_description.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [../phys/module_microphysics_driver.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_state_description.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [../phys/module_physics_addtendc.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_io.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [../share/module_io_domain.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_configure.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [../share/module_date_time.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_state_description.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [../phys/module_physics_init.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_domain.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [nest_init_utils.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_bc.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [module_advect_em.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_model_constants.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [module_big_step_utilities_em.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_cpl.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [../frame/module_dm.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_configure.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [module_small_step_em.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_model_constants.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [module_em.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_bc.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [module_bc_em.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_domain.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [module_sfs_driver.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_state_description.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [module_after_all_rk_steps.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_domain.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [couple_or_uncouple_em.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_domain.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [start_em.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_domain.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [adapt_timestep_em.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_bc.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [module_diffusion_em.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_state_description.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [module_first_rk_step_part1.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_state_description.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [module_first_rk_step_part2.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_state_description.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[2]: [solve_em.o] Error 1 (ignored)
make[2]: [dyn_em] Error 1 (ignored)
make[1]: [em_wrf] Error 1 (ignored)
make[1]: [em_wrf] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_configure.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[1]: [../frame/module_domain.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_state_description.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[1]: [../frame/module_configure.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_cpl.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[1]: [../frame/module_dm.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_domain.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[1]: [../frame/module_integrate.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_configure.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[1]: [../share/module_bc.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_io.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[1]: [../share/module_io_domain.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_date_time.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[1]: [../share/module_soil_pre.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_model_constants.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[1]: [../dyn_em/module_big_step_utilities_em.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_domain.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[1]: [ndown_em.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_configure.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[1]: [../share/module_date_time.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_domain.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[1]: [../share/module_optional_input.o] Error 1 (ignored)
Fatal Error: Cannot read module file ‘module_domain.mod’ opened at (1), because it was created by a different version of GNU Fortran
make[1]: [tc_em.o] Error 1 (ignored)
make[1]: [em_real] Error 1 (ignored)
make[1]: [em_real] Error 1 (ignored)
make[1]: [em_real] Error 1 (ignored)
make[1]: [em_real] Error 1 (ignored)
steeve88
 
Posts: 2
Joined: Tue Apr 02, 2019 6:21 am

Re: Installing WRF - CentOS 6.7 (getting errors on compilati

Postby steeve88 » Wed Apr 03, 2019 3:41 am

Hi again,

I noticed that when i do ./configuration

There is the following message:

testing for MPI_Comm_f2c and MPI_Comm_c2f
MPI_Comm_f2c and MPI_Comm_c2f are not supported

I think it's quite strange as I have loaded openmpi/3.0.0
steeve88
 
Posts: 2
Joined: Tue Apr 02, 2019 6:21 am

Re: Installing WRF - CentOS 6.7 (getting errors on compilati

Postby floktev » Thu Apr 25, 2019 4:16 am

Hi Steve,

Did you compiling for the first time or not? Because for me "becuase it was created in other version..." problems solved when I did ./clean between compilation attempts.
floktev
 
Posts: 3
Joined: Thu Apr 25, 2019 3:56 am


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