WRF/Chem Runtime Error

Any issues with running WRF Chemistry

WRF/Chem Runtime Error

Postby sany.indra » Wed Aug 09, 2017 1:07 am

Hello,
I'm trying to run wrf chem for southeast asia reqion using emission data from PREP-CHEM_SOURCES-1.5. There was no problem until i run wrf.exe, i keep getting this error.

*** glibc detected *** ./wrf.exe: free(): invalid next size (fast): 0x0000000013330130 ***
======= Backtrace: =========
/lib64/libc.so.6(+0x733b6)[0x2b51a0c063b6]
/lib64/libc.so.6(cfree+0x6c)[0x2b51a0c0b2dc]
/usr/local/pgi/linux86-64/11.7/libso/libpgf90.so(pgf90_auto_dealloc+0xd)[0x2b51a00d639d]
./wrf.exe[0x148892b]
======= Memory map: ========
00400000-02057000 r-xp 00000000 08:21 90351700 /praktikum/sany/Build_WRF/WRFV35/WRFV3/main /wrf.exe
02256000-02258000 r-xp 01c56000 08:21 90351700 /praktikum/sany/Build_WRF/WRFV35/WRFV3/main /wrf.exe
02258000-024be000 rwxp 01c58000 08:21 90351700 /praktikum/sany/Build_WRF/WRFV35/WRFV3/main /wrf.exe
024be000-15cbb000 rwxp 00000000 00:00 0 [heap]
2b519f0b0000-2b519f0ce000 r-xp 00000000 08:02 3410130 /lib64/ld-2.11.3.so
2b519f0ce000-2b519f0d0000 rwxp 00000000 00:00 0
2b519f2cd000-2b519f2ce000 r-xp 0001d000 08:02 3410130 /lib64/ld-2.11.3.so
2b519f2ce000-2b519f2cf000 rwxp 0001e000 08:02 3410130 /lib64/ld-2.11.3.so
2b519f2cf000-2b519f2d0000 rwxp 00000000 00:00 0
2b519f2d0000-2b519f31b000 r-xp 00000000 08:02 4721207 /usr/local/netcdf-4.1.3/lib/libnetcdff.so.5 .1.0
2b519f31b000-2b519f51a000 ---p 0004b000 08:02 4721207 /usr/local/netcdf-4.1.3/lib/libnetcdff.so.5 .1.0
2b519f51a000-2b519f51b000 r-xp 0004a000 08:02 4721207 /usr/local/netcdf-4.1.3/lib/libnetcdff.so.5 .1.0
2b519f51b000-2b519f51d000 rwxp 0004b000 08:02 4721207 /usr/local/netcdf-4.1.3/lib/libnetcdff.so.5 .1.0
2b519f51d000-2b519f6b8000 rwxp 00000000 00:00 0
2b519f6b8000-2b519f74b000 r-xp 00000000 08:02 4721199 /usr/local/netcdf-4.1.3/lib/libnetcdf.so.7. 1.1
2b519f74b000-2b519f94b000 ---p 00093000 08:02 4721199 /usr/local/netcdf-4.1.3/lib/libnetcdf.so.7. 1.1
2b519f94b000-2b519f998000 r-xp 00093000 08:02 4721199 /usr/local/netcdf-4.1.3/lib/libnetcdf.so.7. 1.1
2b519f998000-2b519f999000 rwxp 000e0000 08:02 4721199 /usr/local/netcdf-4.1.3/lib/libnetcdf.so.7. 1.1
2b519f999000-2b519f99d000 rwxp 00000000 00:00 0
2b519f9b9000-2b519f9c1000 r-xp 00000000 08:02 3410250 /lib64/librt-2.11.3.so
2b519f9c1000-2b519fbc0000 ---p 00008000 08:02 3410250 /lib64/librt-2.11.3.so
2b519fbc0000-2b519fbc1000 r-xp 00007000 08:02 3410250 /lib64/librt-2.11.3.so
2b519fbc1000-2b519fbc2000 rwxp 00008000 08:02 3410250 /lib64/librt-2.11.3.so
2b519fbc2000-2b519fbc3000 rwxp 00000000 00:00 0
2b519fbc3000-2b519fbda000 r-xp 00000000 08:02 3410245 /lib64/libpthread-2.11.3.so
2b519fbda000-2b519fdda000 ---p 00017000 08:02 3410245 /lib64/libpthread-2.11.3.so
2b519fdda000-2b519fddb000 r-xp 00017000 08:02 3410245 /lib64/libpthread-2.11.3.so
2b519fddb000-2b519fddc000 rwxp 00018000 08:02 3410245 /lib64/libpthread-2.11.3.so
2b519fddc000-2b519fde0000 rwxp 00000000 00:00 0
2b519fde0000-2b519fdf7000 r-xp 00000000 08:02 2895303 /usr/local/pgi/linux86-64/11.7/libso/libpgm p.so
2b519fdf7000-2b519fef7000 ---p 00017000 08:02 2895303 /usr/local/pgi/linux86-64/11.7/libso/libpgm p.so
2b519fef7000-2b519ff38000 rwxp 00017000 08:02 2895303 /usr/local/pgi/linux86-64/11.7/libso/libpgm p.so
2b519ff38000-2b519ff81000 rwxp 00000000 00:00 0
2b519ff81000-2b51a024e000 r-xp 00000000 08:02 2895233 /usr/local/pgi/linux86-64/11.7/libso/libpgf 90.so
2b51a024e000-2b51a034e000 ---p 002cd000 08:02 2895233 /usr/local/pgi/linux86-64/11.7/libso/libpgf 90.so
2b51a034e000-2b51a0366000 rwxp 002cd000 08:02 2895233 /usr/local/pgi/linux86-64/11.7/libso/libpgf 90.so
2b51a0366000-2b51a036a000 rwxp 00000000 00:00 0
2b51a036a000-2b51a036c000 r-xp 00000000 08:02 2895304 /usr/local/pgi/linux86-64/11.7/libso/libpgf 90_rpm1.so
2b51a036c000-2b51a046b000 ---p 00002000 08:02 2895304 /usr/local/pgi/linux86-64/11.7/libso/libpgf 90_rpm1.so
2b51a046b000-2b51a046c000 rwxp 00001000 08:02 2895304 /usr/local/pgi/linux86-64/11.7/libso/libpgf 90_rpm1.so
2b51a046c000-2b51a0475000 r-xp 00000000 08:02 2895301 /usr/local/pgi/linux86-64/11.7/libso/libpgf 902.so
2b51a0475000-2b51a0575000 ---p 00009000 08:02 2895301 /usr/local/pgi/linux86-64/11.7/libso/libpgf 902.so
2b51a0575000-2b51a0577000 rwxp 00009000 08:02 2895301 /usr/local/pgi/linux86-64/11.7/libso/libpgf 902.so
2b51a0577000-2b51a057f000 rwxp 00000000 00:00 0
2b51a057f000-2b51a05ab000 r-xp 00000000 08:02 2895297 /usr/local/pgi/linux86-64/11.7/libso/libpgf 90rtl.so
2b51a05ab000-2b51a06ab000 ---p 0002c000 08:02 2895297 /usr/local/pgi/linux86-64/11.7/libso/libpgf 90rtl.so
2b51a06ab000-2b51a06ad000 rwxp 0002c000 08:02 2895297 /usr/local/pgi/linux86-64/11.7/libso/libpgf 90rtl.so
2b51a06ad000-2b51a06ae000 rwxp 00000000 00:00 0
2b51a06ae000-2b51a06d9000 r-xp 00000000 08:02 2895298 /usr/local/pgi/linux86-64/11.7/libso/libpgf tnrtl.so
2b51a06d9000-2b51a07d9000 ---p 0002b000 08:02 2895298 /usr/local/pgi/linux86-64/11.7/libso/libpgf tnrtl.so
2b51a07d9000-2b51a07db000 rwxp 0002b000 08:02 2895298 /usr/local/pgi/linux86-64/11.7/libso/libpgf tnrtl.so
2b51a07db000-2b51a07dd000 rwxp 00000000 00:00 0
2b51a07dd000-2b51a0830000 r-xp 00000000 08:02 2895306 /usr/local/pgi/linux86-64/11.7/libso/libpgc .so
2b51a0830000-2b51a092f000 ---p 00053000 08:02 2895306 /usr/local/pgi/linux86-64/11.7/libso/libpgc .so
2b51a092f000-2b51a0938000 rwxp 00052000 08:02 2895306 /usr/local/pgi/linux86-64/11.7/libso/libpgc .so
2b51a0938000-2b51a093b000 rwxp 00000000 00:00 0
2b51a093b000-2b51a0991000 r-xp 00000000 08:02 3410140 /lib64/libm-2.11.3.so
2b51a0991000-2b51a0b90000 ---p 00056000 08:02 3410140 /lib64/libm-2.11.3.so
2b51a0b90000-2b51a0b91000 r-xp 00055000 08:02 3410140 /lib64/libm-2.11.3.so
2b51a0b91000-2b51a0b92000 rwxp 00056000 08:02 3410140 /lib64/libm-2.11.3.so
2b51a0b92000-2b51a0b93000 rwxp 00000000 00:00 0
2b51a0b93000-2b51a0cf7000 r-xp 00000000 08:02 3410113 /lib64/libc-2.11.3.so
2b51a0cf7000-2b51a0ef6000 ---p 00164000 08:02 3410113 /lib64/libc-2.11.3.so
2b51a0ef6000-2b51a0efa000 r-xp 00163000 08:02 3410113 /lib64/libc-2.11.3.so*** glibc detected *** ./wrf.exe: free(): invalid next size (fast): 0x00000000137cb810 ***
======= Backtrace: =========
/lib64/libc.so.6(+0x733b6)[0x2b80b50e63b6]
/lib64/libc.so.6(cfree+0x6c)[0x2b80b50eb2dc]
/usr/local/pgi/linux86-64/11.7/libso/libpgf90.so(pgf90_auto_dealloc+0xd)[0x2b80b45b639d]
./wrf.exe[0x148892b]
======= Memory map: ========
00400000-02057000 r-xp 00000000 08:21 90351700 /praktikum/sany/Build_WRF/WRFV35/WRFV3/main /wrf.exe
02256000-02258000 r-xp 01c56000 08:21 90351700 /praktikum/sany/Build_WRF/WRFV35/WRFV3/main /wrf.exe
02258000-024be000 rwxp 01c58000 08:21 90351700 /praktikum/sany/Build_WRF/WRFV35/WRFV3/main /wrf.exe
024be000-163f8000 rwxp 00000000 00:00 0 [heap]
2b80b3590000-2b80b35ae000 r-xp 00000000 08:02 3410130 /lib64/ld-2.11.3.so
2b80b35ae000-2b80b35b0000 rwxp 00000000 00:00 0
2b80b37ad000-2b80b37ae000 r-xp 0001d000 08:02 3410130 /lib64/ld-2.11.3.so
2b80b37ae000-2b80b37af000 rwxp 0001e000 08:02 3410130 /lib64/ld-2.11.3.so
2b80b37af000-2b80b37b0000 rwxp 00000000 00:00 0
2b80b37b0000-2b80b37fb000 r-xp 00000000 08:02 4721207 /usr/local/netcdf-4.1.3/lib/libnetcdff.so.5 .1.0
2b80b37fb000-2b80b39fa000 ---p 0004b000 08:02 4721207 /usr/local/netcdf-4.1.3/lib/libnetcdff.so.5 .1.0
2b80b39fa000-2b80b39fb000 r-xp 0004a000 08:02 4721207 /usr/local/netcdf-4.1.3/lib/libnetcdff.so.5 .1.0
2b80b39fb000-2b80b39fd000 rwxp 0004b000 08:02 4721207 /usr/local/netcdf-4.1.3/lib/libnetcdff.so.5 .1.0
2b80b39fd000-2b80b3b98000 rwxp 00000000 00:00 0
2b80b3b98000-2b80b3c2b000 r-xp 00000000 08:02 4721199 /usr/local/netcdf-4.1.3/lib/libnetcdf.so.7. 1.1
2b80b3c2b000-2b80b3e2b000 ---p 00093000 08:02 4721199 /usr/local/netcdf-4.1.3/lib/libnetcdf.so.7. 1.1
2b80b3e2b000-2b80b3e78000 r-xp 00093000 08:02 4721199 /usr/local/netcdf-4.1.3/lib/libnetcdf.so.7. 1.1
2b80b3e78000-2b80b3e79000 rwxp 000e0000 08:02 4721199 /usr/local/netcdf-4.1.3/lib/libnetcdf.so.7. 1.1
2b80b3e79000-2b80b3e7d000 rwxp 00000000 00:00 0
2b80b3e99000-2b80b3ea1000 r-xp 00000000 08:02 3410250 /lib64/librt-2.11.3.so
2b80b3ea1000-2b80b40a0000 ---p 00008000 08:02 3410250 /lib64/librt-2.11.3.so
2b80b40a0000-2b80b40a1000 r-xp 00007000 08:02 3410250 /lib64/librt-2.11.3.so
2b80b40a1000-2b80b40a2000 rwxp 00008000 08:02 3410250 /lib64/librt-2.11.3.so
2b80b40a2000-2b80b40a3000 rwxp 00000000 00:00 0
2b80b40a3000-2b80b40ba000 r-xp 00000000 08:02 3410245 /lib64/libpthread-2.11.3.so
2b80b40ba000-2b80b42ba000 ---p 00017000 08:02 3410245 /lib64/libpthread-2.11.3.so
2b80b42ba000-2b80b42bb000 r-xp 00017000 08:02 3410245 /lib64/libpthread-2.11.3.so
2b80b42bb000-2b80b42bc000 rwxp 00018000 08:02 3410245 /lib64/libpthread-2.11.3.so
2b80b42bc000-2b80b42c0000 rwxp 00000000 00:00 0
2b80b42c0000-2b80b42d7000 r-xp 00000000 08:02 2895303 /usr/local/pgi/linux86-64/11.7/libso/libpgm p.so
2b80b42d7000-2b80b43d7000 ---p 00017000 08:02 2895303 /usr/local/pgi/linux86-64/11.7/libso/libpgm p.so
2b80b43d7000-2b80b4418000 rwxp 00017000 08:02 2895303 /usr/local/pgi/linux86-64/11.7/libso/libpgm p.so
2b80b4418000-2b80b4461000 rwxp 00000000 00:00 0
2b80b4461000-2b80b472e000 r-xp 00000000 08:02 2895233 /usr/local/pgi/linux86-64/11.7/libso/libpgf 90.so
2b80b472e000-2b80b482e000 ---p 002cd000 08:02 2895233 /usr/local/pgi/linux86-64/11.7/libso/libpgf 90.so
2b80b482e000-2b80b4846000 rwxp 002cd000 08:02 2895233 /usr/local/pgi/linux86-64/11.7/libso/libpgf 90.so
2b80b4846000-2b80b484a000 rwxp 00000000 00:00 0
2b80b484a000-2b80b484c000 r-xp 00000000 08:02 2895304 /usr/local/pgi/linux86-64/11.7/libso/libpgf 90_rpm1.so
2b80b484c000-2b80b494b000 ---p 00002000 08:02 2895304 /usr/local/pgi/linux86-64/11.7/libso/libpgf 90_rpm1.so
2b80b494b000-2b80b494c000 rwxp 00001000 08:02 2895304 /usr/local/pgi/linux86-64/11.7/libso/libpgf 90_rpm1.so
2b80b494c000-2b80b4955000 r-xp 00000000 08:02 2895301 /usr/local/pgi/linux86-64/11.7/libso/libpgf 902.so
2b80b4955000-2b80b4a55000 ---p 00009000 08:02 2895301 /usr/local/pgi/linux86-64/11.7/libso/libpgf 902.so
2b80b4a55000-2b80b4a57000 rwxp 00009000 08:02 2895301 /usr/local/pgi/linux86-64/11.7/libso/libpgf 902.so
2b80b4a57000-2b80b4a5f000 rwxp 00000000 00:00 0
2b80b4a5f000-2b80b4a8b000 r-xp 00000000 08:02 2895297 /usr/local/pgi/linux86-64/11.7/libso/libpgf 90rtl.so
2b80b4a8b000-2b80b4b8b000 ---p 0002c000 08:02 2895297 /usr/local/pgi/linux86-64/11.7/libso/libpgf 90rtl.so
2b80b4b8b000-2b80b4b8d000 rwxp 0002c000 08:02 2895297 /usr/local/pgi/linux86-64/11.7/libso/libpgf 90rtl.so
2b80b4b8d000-2b80b4b8e000 rwxp 00000000 00:00 0
2b80b4b8e000-2b80b4bb9000 r-xp 00000000 08:02 2895298 /usr/local/pgi/linux86-64/11.7/libso/libpgf tnrtl.so
2b80b4bb9000-2b80b4cb9000 ---p 0002b000 08:02 2895298 /usr/local/pgi/linux86-64/11.7/libso/libpgf tnrtl.so
2b80b4cb9000-2b80b4cbb000 rwxp 0002b000 08:02 2895298 /usr/local/pgi/linux86-64/11.7/libso/libpgf tnrtl.so
2b80b4cbb000-2b80b4cbd000 rwxp 00000000 00:00 0
2b80b4cbd000-2b80b4d10000 r-xp 00000000 08:02 2895306 /usr/local/pgi/linux86-64/11.7/libso/libpgc .so
2b80b4d10000-2b80b4e0f000 ---p 00053000 08:02 2895306 /usr/local/pgi/linux86-64/11.7/libso/libpgc .so
2b80b4e0f000-2b80b4e18000 rwxp 00052000 08:02 2895306 /usr/local/pgi/linux86-64/11.7/libso/libpgc .so
2b80b4e18000-2b80b4e1b000 rwxp 00000000 00:00 0
2b80b4e1b000-2b80b4e71000 r-xp 00000000 08:02 3410140 /lib64/libm-2.11.3.so
2b80b4e71000-2b80b5070000 ---p 00056000 08:02 3410140 /lib64/libm-2.11.3.so
2b80b5070000-2b80b5071000 r-xp 00055000 08:02 3410140 /lib64/libm-2.11.3.so
2b80b5071000-2b80b5072000 rwxp 00056000 08:02 3410140 /lib64/libm-2.11.3.so
2b80b5072000-2b80b5073000 rwxp 00000000 00:00 0
2b80b5073000-2b80b51d7000 r-xp 00000000 08:02 3410113 /lib64/libc-2.11.3.so
2b80b51d7000-2b80b53d6000 ---p 00164000 08:02 3410113 /lib64/libc-2.11.3.so
2b80b53d6000-2b80b53da000 r-xp 00163000 08:02 3410113 /lib64/libc-2.11.3.so*** glibc detected *** ./wrf.exe: free(): invalid next size (fast): 0x0000000012f64490 ***
======= Backtrace: =========
/lib64/libc.so.6(+0x733b6)[0x2aeeaa0a33b6]
/lib64/libc.so.6(cfree+0x6c)[0x2aeeaa0a82dc]
/usr/local/pgi/linux86-64/11.7/libso/libpgf90.so(pgf90_auto_dealloc+0xd)[0x2aeea957339d]
./wrf.exe[0x148892b]
======= Memory map: ========
00400000-02057000 r-xp 00000000 08:21 90351700 /praktikum/sany/Build_WRF/WRFV35/WRFV3/main /wrf.exe
02256000-02258000 r-xp 01c56000 08:21 90351700 /praktikum/sany/Build_WRF/WRFV35/WRFV3/main /wrf.exe
02258000-024be000 rwxp 01c58000 08:21 90351700 /praktikum/sany/Build_WRF/WRFV35/WRFV3/main /wrf.exe
024be000-15597000 rwxp 00000000 00:00 0 [heap]
2aeea854d000-2aeea856b000 r-xp 00000000 08:02 3410130 /lib64/ld-2.11.3.so
2aeea856b000-2aeea856d000 rwxp 00000000 00:00 0
2aeea876a000-2aeea876b000 r-xp 0001d000 08:02 3410130 /lib64/ld-2.11.3.so
2aeea876b000-2aeea876c000 rwxp 0001e000 08:02 3410130 /lib64/ld-2.11.3.so
2aeea876c000-2aeea876d000 rwxp 00000000 00:00 0
2aeea876d000-2aeea87b8000 r-xp 00000000 08:02 4721207 /usr/local/netcdf-4.1.3/lib/libnetcdff.so.5 .1.0
2aeea87b8000-2aeea89b7000 ---p 0004b000 08:02 4721207 /usr/local/netcdf-4.1.3/lib/libnetcdff.so.5 .1.0
2aeea89b7000-2aeea89b8000 r-xp 0004a000 08:02 4721207 /usr/local/netcdf-4.1.3/lib/libnetcdff.so.5 .1.0
2aeea89b8000-2aeea89ba000 rwxp 0004b000 08:02 4721207 /usr/local/netcdf-4.1.3/lib/libnetcdff.so.5 .1.0
2aeea89ba000-2aeea8b55000 rwxp 00000000 00:00 0
2aeea8b55000-2aeea8be8000 r-xp 00000000 08:02 4721199 /usr/local/netcdf-4.1.3/lib/libnetcdf.so.7. 1.1
2aeea8be8000-2aeea8de8000 ---p 00093000 08:02 4721199 /usr/local/netcdf-4.1.3/lib/libnetcdf.so.7. 1.1
2aeea8de8000-2aeea8e35000 r-xp 00093000 08:02 4721199 /usr/local/netcdf-4.1.3/lib/libnetcdf.so.7. 1.1
2aeea8e35000-2aeea8e36000 rwxp 000e0000 08:02 4721199 /usr/local/netcdf-4.1.3/lib/libnetcdf.so.7. 1.1
2aeea8e36000-2aeea8e3a000 rwxp 00000000 00:00 0
2aeea8e56000-2aeea8e5e000 r-xp 00000000 08:02 3410250 /lib64/librt-2.11.3.so
2aeea8e5e000-2aeea905d000 ---p 00008000 08:02 3410250 /lib64/librt-2.11.3.so
2aeea905d000-2aeea905e000 r-xp 00007000 08:02 3410250 /lib64/librt-2.11.3.so
2aeea905e000-2aeea905f000 rwxp 00008000 08:02 3410250 /lib64/librt-2.11.3.so
2aeea905f000-2aeea9060000 rwxp 00000000 00:00 0
2aeea9060000-2aeea9077000 r-xp 00000000 08:02 3410245 /lib64/libpthread-2.11.3.so
2aeea9077000-2aeea9277000 ---p 00017000 08:02 3410245 /lib64/libpthread-2.11.3.so
2aeea9277000-2aeea9278000 r-xp 00017000 08:02 3410245 /lib64/libpthread-2.11.3.so
2aeea9278000-2aeea9279000 rwxp 00018000 08:02 3410245 /lib64/libpthread-2.11.3.so
2aeea9279000-2aeea927d000 rwxp 00000000 00:00 0
2aeea927d000-2aeea9294000 r-xp 00000000 08:02 2895303 /usr/local/pgi/linux86-64/11.7/libso/libpgm p.so
2aeea9294000-2aeea9394000 ---p 00017000 08:02 2895303 /usr/local/pgi/linux86-64/11.7/libso/libpgm p.so
2aeea9394000-2aeea93d5000 rwxp 00017000 08:02 2895303 /usr/local/pgi/linux86-64/11.7/libso/libpgm p.so
2aeea93d5000-2aeea941e000 rwxp 00000000 00:00 0
2aeea941e000-2aeea96eb000 r-xp 00000000 08:02 2895233 /usr/local/pgi/linux86-64/11.7/libso/libpgf 90.so
2aeea96eb000-2aeea97eb000 ---p 002cd000 08:02 2895233 /usr/local/pgi/linux86-64/11.7/libso/libpgf 90.so
2aeea97eb000-2aeea9803000 rwxp 002cd000 08:02 2895233 /usr/local/pgi/linux86-64/11.7/libso/libpgf 90.so
2aeea9803000-2aeea9807000 rwxp 00000000 00:00 0
2aeea9807000-2aeea9809000 r-xp 00000000 08:02 2895304 /usr/local/pgi/linux86-64/11.7/libso/libpgf 90_rpm1.so
2aeea9809000-2aeea9908000 ---p 00002000 08:02 2895304 /usr/local/pgi/linux86-64/11.7/libso/libpgf 90_rpm1.so
2aeea9908000-2aeea9909000 rwxp 00001000 08:02 2895304 /usr/local/pgi/linux86-64/11.7/libso/libpgf 90_rpm1.so
2aeea9909000-2aeea9912000 r-xp 00000000 08:02 2895301 /usr/local/pgi/linux86-64/11.7/libso/libpgf 902.so
2aeea9912000-2aeea9a12000 ---p 00009000 08:02 2895301 /usr/local/pgi/linux86-64/11.7/libso/libpgf 902.so
2aeea9a12000-2aeea9a14000 rwxp 00009000 08:02 2895301 /usr/local/pgi/linux86-64/11.7/libso/libpgf 902.so
2aeea9a14000-2aeea9a1c000 rwxp 00000000 00:00 0
2aeea9a1c000-2aeea9a48000 r-xp 00000000 08:02 2895297 /usr/local/pgi/linux86-64/11.7/libso/libpgf 90rtl.so
2aeea9a48000-2aeea9b48000 ---p 0002c000 08:02 2895297 /usr/local/pgi/linux86-64/11.7/libso/libpgf 90rtl.so
2aeea9b48000-2aeea9b4a000 rwxp 0002c000 08:02 2895297 /usr/local/pgi/linux86-64/11.7/libso/libpgf 90rtl.so
2aeea9b4a000-2aeea9b4b000 rwxp 00000000 00:00 0
2aeea9b4b000-2aeea9b76000 r-xp 00000000 08:02 2895298 /usr/local/pgi/linux86-64/11.7/libso/libpgf tnrtl.so
2aeea9b76000-2aeea9c76000 ---p 0002b000 08:02 2895298 /usr/local/pgi/linux86-64/11.7/libso/libpgf tnrtl.so
2aeea9c76000-2aeea9c78000 rwxp 0002b000 08:02 2895298 /usr/local/pgi/linux86-64/11.7/libso/libpgf tnrtl.so
2aeea9c78000-2aeea9c7a000 rwxp 00000000 00:00 0
2aeea9c7a000-2aeea9ccd000 r-xp 00000000 08:02 2895306 /usr/local/pgi/linux86-64/11.7/libso/libpgc .so
2aeea9ccd000-2aeea9dcc000 ---p 00053000 08:02 2895306 /usr/local/pgi/linux86-64/11.7/libso/libpgc .so
2aeea9dcc000-2aeea9dd5000 rwxp 00052000 08:02 2895306 /usr/local/pgi/linux86-64/11.7/libso/libpgc .so
2aeea9dd5000-2aeea9dd8000 rwxp 00000000 00:00 0
2aeea9dd8000-2aeea9e2e000 r-xp 00000000 08:02 3410140 /lib64/libm-2.11.3.so
2aeea9e2e000-2aeeaa02d000 ---p 00056000 08:02 3410140 /lib64/libm-2.11.3.so
2aeeaa02d000-2aeeaa02e000 r-xp 00055000 08:02 3410140 /lib64/libm-2.11.3.so
2aeeaa02e000-2aeeaa02f000 rwxp 00056000 08:02 3410140 /lib64/libm-2.11.3.so
2aeeaa02f000-2aeeaa030000 rwxp 00000000 00:00 0
2aeeaa030000-2aeeaa194000 r-xp 00000000 08:02 3410113 /lib64/libc-2.11.3.so
2aeeaa194000-2aeeaa393000 ---p 00164000 08:02 3410113 /lib64/libc-2.11.3.so
2aeeaa393000-2aeeaa397000 r-xp 00163000 08:02 3410113 /lib64/libc-2.11.3.so
2aeeaa397000-2aeeaa398000 rwxp 00167000 08:02 3410113 /lib64/libc-2.11.3.so
2aeeaa398000-2aeeaa3a0000 rwxp 00000000 00:00 0
2aeeaa3a0000-2aeeb0b68000 rwxs 00000000 00:0f 1605263 /dev/shm/mpich_shar_tmpKHJsnf (deleted)*** glibc detected *** ./wrf.exe: free(): invalid next size (fast): 0x00000000133f2d80 ***
*** glibc detected *** ./wrf.exe: free(): invalid next size (fast): 0x0000000012f74590 ***
======= Backtrace: =========
/lib64/libc.so.6(+0x733b6)[0x2b6aaee9f3b6]
/lib64/libc.so.6(cfree+0x6c)[0x2b6aaeea42dc]
/usr/local/pgi/linux86-64/11.7/libso/libpgf90.so(pgf90_auto_dealloc+0xd)[0x2b6aae36f39d]
./wrf.exe[0x148892b]
======= Memory map: ========
/lib64/libc.so.6(+0x733b6)[0x2b8c0aa3e3b6]
00400000-02057000 r-xp 00000000 08:21 90351700 /praktikum/sany/Build_WRF/WRFV35/WRFV3/main /wrf.exe
02256000-02258000 r-xp 01c56000 08:21 90351700 /praktikum/sany/Build_WRF/WRFV35/WRFV3/main /wrf.exe
02258000-024be000 rwxp 01c58000 08:21 90351700 /praktikum/sany/Build_WRF/WRFV35/WRFV3/main /wrf.exe
024be000-15cd0000 rwxp 00000000 00:00 0 [heap]
2b6aad349000-2b6aad367000 r-xp 00000000 08:02 3410130 /lib64/ld-2.11.3.so
2b6aad367000-2b6aad369000 rwxp 00000000 00:00 0
2b6aad566000-2b6aad567000 r-xp 0001d000 08:02 3410130 /lib64/ld-2.11.3.so
2b6aad567000-2b6aad568000 rwxp 0001e000 08:02 3410130 /lib64/ld-2.11.3.so
2b6aad568000-2b6aad569000 rwxp 00000000 00:00 0
2b6aad569000-2b6aad5b4000 r-xp 00000000 08:02 4721207 /usr/local/netcdf-4.1.3/lib/libnetcdff.so.5 .1.0
2b6aad5b4000-2b6aad7b3000 ---p 0004b000 08:02 4721207 /usr/local/netcdf-4.1.3/lib/libnetcdff.so.5 .1.0
2b6aad7b3000-2b6aad7b4000 r-xp 0004a000 08:02 4721207 /usr/local/netcdf-4.1.3/lib/libnetcdff.so.5 .1.0
2b6aad7b4000-2b6aad7b6000 rwxp 0004b000 08:02 4721207 /usr/local/netcdf-4.1.3/lib/libnetcdff.so.5 .1.0
2b6aad7b6000-2b6aad951000 rwxp 00000000 00:00 0
2b6aad951000-2b6aad9e4000 r-xp 00000000 08:02 4721199 /usr/local/netcdf-4.1.3/lib/libnetcdf.so.7. 1.1
2b6aad9e4000-2b6aadbe4000 ---p 00093000 08:02 4721199 /usr/local/netcdf-4.1.3/lib/libnetcdf.so.7. 1.1
2b6aadbe4000-2b6aadc31000 r-xp 00093000 08:02 4721199 /usr/local/netcdf-4.1.3/lib/libnetcdf.so.7. 1.1
2b6aadc31000-2b6aadc32000 rwxp 000e0000 08:02 4721199 /usr/local/netcdf-4.1.3/lib/libnetcdf.so.7. 1.1
2b6aadc32000-2b6aadc36000 rwxp 00000000 00:00 0
2b6aadc52000-2b6aadc5a000 r-xp 00000000 08:02 3410250 /lib64/librt-2.11.3.so
2b6aadc5a000-2b6aade59000 ---p 00008000 08:02 3410250 ./wrf.exe[0x148892b]
======= Memory map: ========
/lib64/librt-2.11.3.so
2b6aade59000-2b6aade5a000 r-xp 00007000 08:02 3410250 /lib64/librt-2.11.3.so
2b6aade5a000-2b6aade5b000 rwxp 00008000 08:02 3410250 /lib64/librt-2.11.3.so
2b6aade5b000-2b6aade5c000 rwxp 00000000 00:00 0
2b6aade5c000-2b6aade73000 r-xp 00000000 08:02 3410245 /lib64/libpthread-2.11.3.so
2b6aade73000-2b6aae073000 ---p 00017000 08:02 3410245 /lib64/libpthread-2.11.3.so
2b6aae073000-2b6aae074000 r-xp 00017000 08:02 3410245 /lib64/libpthread-2.11.3.so
2b6aae074000-2b6aae075000 rwxp 00018000 08:02 3410245 /lib64/libpthread-2.11.3.so
2b6aae075000-2b6aae079000 rwxp 00000000 00:00 0
2b6aae079000-2b6aae090000 r-xp 00000000 08:02 2895303 /usr/local/pgi/linux86-64/11.7/libso/libpgm p.so
2b6aae090000-2b6aae190000 ---p 00017000 08:02 2895303 /usr/local/pgi/linux86-64/11.7/libso/libpgm p.so
2b6aae190000-2b6aae1d1000 rwxp 00017000 08:02 2895303 /usr/local/pgi/linux86-64/11.7/libso/libpgm p.so
2b6aae1d1000-2b6aae21a000 rwxp 00000000 00:00 0
2b6aae21a000-2b6aae4e7000 r-xp 00000000 08:02 2895233 /usr/local/pgi/linux86-64/11.7/libso/libpgf 90.so
2b6aae4e7000-2b6aae5e7000 ---p 002cd000 08:02 2895233 /usr/local/pgi/linux86-64/11.7/libso/libpgf 90.so
2b6aae5e7000-2b6aae5ff000 rwxp 002cd000 08:02 2895233 /usr/local/pgi/linux86-64/11.7/libso/libpgf 90.so
2b6aae5ff000-2b6aae603000 rwxp 00000000 00:00 0
2b6aae603000-2b6aae605000 r-xp 00000000 08:02 2895304 /usr/local/pgi/linux86-64/11.7/libso/libpgf 90_rpm1.so
2b6aae605000-2b6aae704000 ---p 00002000 08:02 2895304 /usr/local/pgi/linux86-64/11.7/libso/libpgf 90_rpm1.so
2b6aae704000-2b6aae705000 rwxp 00001000 08:02 2895304 /usr/local/pgi/linux86-64/11.7/libso/libpgf 90_rpm1.so
2b6aae705000-2b6aae70e000 r-xp 00000000 08:02 2895301 /usr/local/pgi/linux86-64/11.7/libso/libpgf 902.so
2b6aae70e000-2b6aae80e000 ---p 00009000 08:02 2895301 /usr/local/pgi/linux86-64/11.7/libso/libpgf 902.so
2b6aae80e000-2b6aae810000 rwxp 00009000 08:02 2895301 /usr/local/pgi/linux86-64/11.7/libso/libpgf 902.so
2b6aae810000-2b6aae818000 rwxp 00000000 00:00 0
2b6aae818000-2b6aae844000 r-xp 00000000 08:02 2895297 /usr/local/pgi/linux86-64/11.7/libso/libpgf 90rtl.so
2b6aae844000-2b6aae944000 ---p 0002c000 08:02 2895297 /usr/local/pgi/linux86-64/11.7/libso/libpgf 90rtl.so
2b6aae944000-2b6aae946000 rwxp 0002c000 08:02 2895297 /usr/local/pgi/linux86-64/11.7/libso/libpgf 90rtl.so
2b6aae946000-2b6aae947000 rwxp 00000000 00:00 0
2b6aae947000-2b6aae972000 r-xp 00000000 08:02 2895298 /usr/local/pgi/linux86-64/11.7/libso/libpgf tnrtl.so
2b6aae972000-2b6aaea72000 ---p 0002b000 08:02 2895298 /usr/local/pgi/linux86-64/11.7/libso/libpgf tnrtl.so
2b6aaea72000-2b6aaea74000 rwxp 0002b000 08:02 2895298 /usr/local/pgi/linux86-64/11.7/libso/libpgf tnrtl.so
2b6aaea74000-2b6aaea76000 rwxp 00000000 00:00 0
2b6aaea76000-2b6aaeac9000 r-xp 00000000 08:02 2895306 /usr/local/pgi/linux86-64/11.7/libso/libpgc .so
2b6aaeac9000-2b6aaebc8000 ---p 00053000 08:02 2895306 /usr/local/pgi/linux86-64/11.7/libso/libpgc .so
2b6aaebc8000-2b6aaebd1000 rwxp 00052000 08:02 2895306 /usr/local/pgi/linux86-64/11.7/libso/libpgc .so
2b6aaebd1000-2b6aaebd4000 rwxp 00000000 00:00 0
2b6aaebd4000-2b6aaec2a000 r-xp 00000000 08:02 3410140 /lib64/libm-2.11.3.so
2b6aaec2a000-2b6aaee29000 ---p 00056000 08:02 3410140 /lib64/libm-2.11.3.so
2b6aaee29000-2b6aaee2a000 r-xp 00055000 08:02 3410140 /lib64/libm-2.11.3.so
2b6aaee2a000-2b6aaee2b000 rwxp 00056000 08:02 3410140 /lib64/libm-2.11.3.so
2b6aaee2b000-2b6aaee2c000 rwxp 00000000 00:00 0
2b6aaee2c000-2b6aaef90000 r-xp 00000000 08:02 3410113 /lib64/libc-2.11.3.so
2b6aaef90000-2b6aaf18f000 ---p 00164000 08:02 3410113 /lib64/libc-2.11.3.so
2b6aaf18f000-2b6aaf193000 r-xp 00163000 08:02 3410113 /lib64/libc-2.11.3.so*** glibc detected *** ./wrf.exe: free(): invalid next size (fast): 0x0000000013c7c3d0 ***
======= Backtrace: =========
/lib64/libc.so.6(+0x733b6)[0x2b0e20ad13b6]
/lib64/libc.so.6(cfree+0x6c)[0x2b0e20ad62dc]
/usr/local/pgi/linux86-64/11.7/libso/libpgf90.so(pgf90_auto_dealloc+0xd)[0x2b0e1ffa139d]
./wrf.exe[0x148892b]
======= Memory map: ========
00400000-02057000 r-xp 00000000 08:21 90351700 /praktikum/sany/Build_WRF/WRFV35/WRFV3/main /wrf.exe
02256000-02258000 r-xp 01c56000 08:21 90351700 /praktikum/sany/Build_WRF/WRFV35/WRFV3/main /wrf.exe
02258000-024be000 rwxp 01c58000 08:21 90351700 /praktikum/sany/Build_WRF/WRFV35/WRFV3/main /wrf.exe
024be000-169ad000 rwxp 00000000 00:00 0 [heap]
2b0e1ef7b000-2b0e1ef99000 r-xp 00000000 08:02 3410130 /lib64/ld-2.11.3.so
2b0e1ef99000-2b0e1ef9b000 rwxp 00000000 00:00 0
2b0e1f198000-2b0e1f199000 r-xp 0001d000 08:02 3410130 /lib64/ld-2.11.3.so
2b0e1f199000-2b0e1f19a000 rwxp 0001e000 08:02 3410130 /lib64/ld-2.11.3.so
2b0e1f19a000-2b0e1f19b000 rwxp 00000000 00:00 0
2b0e1f19b000-2b0e1f1e6000 r-xp 00000000 08:02 4721207 /usr/local/netcdf-4.1.3/lib/libnetcdff.so.5 .1.0
2b0e1f1e6000-2b0e1f3e5000 ---p 0004b000 08:02 4721207 /usr/local/netcdf-4.1.3/lib/libnetcdff.so.5 .1.0
2b0e1f3e5000-2b0e1f3e6000 r-xp 0004a000 08:02 4721207 /usr/local/netcdf-4.1.3/lib/libnetcdff.so.5 .1.0
2b0e1f3e6000-2b0e1f3e8000 rwxp 0004b000 08:02 4721207 /usr/local/netcdf-4.1.3/lib/libnetcdff.so.5 .1.0
2b0e1f3e8000-2b0e1f583000 rwxp 00000000 00:00 0
2b0e1f583000-2b0e1f616000 r-xp 00000000 08:02 4721199 /usr/local/netcdf-4.1.3/lib/libnetcdf.so.7. 1.1
2b0e1f616000-2b0e1f816000 ---p 00093000 08:02 4721199 /usr/local/netcdf-4.1.3/lib/libnetcdf.so.7. 1.1
2b0e1f816000-2b0e1f863000 r-xp 00093000 08:02 4721199 /usr/local/netcdf-4.1.3/lib/libnetcdf.so.7. 1.1
2b0e1f863000-2b0e1f864000 rwxp 000e0000 08:02 4721199 /usr/local/netcdf-4.1.3/lib/libnetcdf.so.7. 1.1
2b0e1f864000-2b0e1f868000 rwxp 00000000 00:00 0
2b0e1f884000-2b0e1f88c000 r-xp 00000000 08:02 3410250 /lib64/librt-2.11.3.so
2b0e1f88c000-2b0e1fa8b000 ---p 00008000 08:02 3410250 /lib64/librt-2.11.3.so
2b0e1fa8b000-2b0e1fa8c000 r-xp 00007000 08:02 3410250 /lib64/librt-2.11.3.so
2b0e1fa8c000-2b0e1fa8d000 rwxp 00008000 08:02 3410250 /lib64/librt-2.11.3.so
2b0e1fa8d000-2b0e1fa8e000 rwxp 00000000 00:00 0
2b0e1fa8e000-2b0e1faa5000 r-xp 00000000 08:02 3410245 /lib64/libpthread-2.11.3.so
2b0e1faa5000-2b0e1fca5000 ---p 00017000 08:02 3410245 /lib64/libpthread-2.11.3.so
2b0e1fca5000-2b0e1fca6000 r-xp 00017000 08:02 3410245 /lib64/libpthread-2.11.3.so
2b0e1fca6000-2b0e1fca7000 rwxp 00018000 08:02 3410245 /lib64/libpthread-2.11.3.so
2b0e1fca7000-2b0e1fcab000 rwxp 00000000 00:00 0
2b0e1fcab000-2b0e1fcc2000 r-xp 00000000 08:02 2895303 /usr/local/pgi/linux86-64/11.7/libso/libpgm p.so
2b0e1fcc2000-2b0e1fdc2000 ---p 00017000 08:02 2895303 /usr/local/pgi/linux86-64/11.7/libso/libpgm p.so
2b0e1fdc2000-2b0e1fe03000 rwxp 00017000 08:02 2895303 /usr/local/pgi/linux86-64/11.7/libso/libpgm p.so
2b0e1fe03000-2b0e1fe4c000 rwxp 00000000 00:00 0
2b0e1fe4c000-2b0e20119000 r-xp 00000000 08:02 2895233 /usr/local/pgi/linux86-64/11.7/libso/libpgf 90.so
2b0e20119000-2b0e20219000 ---p 002cd000 08:02 2895233 /usr/local/pgi/linux86-64/11.7/libso/libpgf 90.so
2b0e20219000-2b0e20231000 rwxp 002cd000 08:02 2895233 /usr/local/pgi/linux86-64/11.7/libso/libpgf 90.so
2b0e20231000-2b0e20235000 rwxp 00000000 00:00 0
2b0e20235000-2b0e20237000 r-xp 00000000 08:02 2895304 /usr/local/pgi/linux86-64/11.7/libso/libpgf 90_rpm1.so
2b0e20237000-2b0e20336000 ---p 00002000 08:02 2895304 /usr/local/pgi/linux86-64/11.7/libso/libpgf 90_rpm1.so
2b0e20336000-2b0e20337000 rwxp 00001000 08:02 2895304 /usr/local/pgi/linux86-64/11.7/libso/libpgf 90_rpm1.so
2b0e20337000-2b0e20340000 r-xp 00000000 08:02 2895301 /usr/local/pgi/linux86-64/11.7/libso/libpgf 902.so
2b0e20340000-2b0e20440000 ---p 00009000 08:02 2895301 /usr/local/pgi/linux86-64/11.7/libso/libpgf 902.so
2b0e20440000-2b0e20442000 rwxp 00009000 08:02 2895301 /usr/local/pgi/linux86-64/11.7/libso/libpgf 902.so
2b0e20442000-2b0e2044a000 rwxp 00000000 00:00 0
2b0e2044a000-2b0e20476000 r-xp 00000000 08:02 2895297 /usr/local/pgi/linux86-64/11.7/libso/libpgf 90rtl.so
2b0e20476000-2b0e20576000 ---p 0002c000 08:02 2895297 /usr/local/pgi/linux86-64/11.7/libso/libpgf 90rtl.so
2b0e20576000-2b0e20578000 rwxp 0002c000 08:02 2895297 /usr/local/pgi/linux86-64/11.7/libso/libpgf 90rtl.so
2b0e20578000-2b0e20579000 rwxp 00000000 00:00 0
2b0e20579000-2b0e205a4000 r-xp 00000000 08:02 2895298 /usr/local/pgi/linux86-64/11.7/libso/libpgf tnrtl.so
2b0e205a4000-2b0e206a4000 ---p 0002b000 08:02 2895298 /usr/local/pgi/linux86-64/11.7/libso/libpgf tnrtl.so
2b0e206a4000-2b0e206a6000 rwxp 0002b000 08:02 2895298 /usr/local/pgi/linux86-64/11.7/libso/libpgf tnrtl.so
2b0e206a6000-2b0e206a8000 rwxp 00000000 00:00 0
2b0e206a8000-2b0e206fb000 r-xp 00000000 08:02 2895306 /usr/local/pgi/linux86-64/11.7/libso/libpgc .so
2b0e206fb000-2b0e207fa000 ---p 00053000 08:02 2895306 /usr/local/pgi/linux86-64/11.7/libso/libpgc .so
2b0e207fa000-2b0e20803000 rwxp 00052000 08:02 2895306 /usr/local/pgi/linux86-64/11.7/libso/libpgc .so
2b0e20803000-2b0e20806000 rwxp 00000000 00:00 0
2b0e20806000-2b0e2085c000 r-xp 00000000 08:02 3410140 /lib64/libm-2.11.3.so
2b0e2085c000-2b0e20a5b000 ---p 00056000 08:02 3410140 /lib64/libm-2.11.3.so
2b0e20a5b000-2b0e20a5c000 r-xp 00055000 08:02 3410140 /lib64/libm-2.11.3.so
2b0e20a5c000-2b0e20a5d000 rwxp 00056000 08:02 3410140 /lib64/libm-2.11.3.so
2b0e20a5d000-2b0e20a5e000 rwxp 00000000 00:00 0
2b0e20a5e000-2b0e20bc2000 r-xp 00000000 08:02 3410113 /lib64/libc-2.11.3.so
2b0e20bc2000-2b0e20dc1000 ---p 00164000 08:02 3410113 /lib64/libc-2.11.3.so
2b0e20dc1000-2b0e20dc5000 r-xp 00163000 08:02 3410113 /lib64/libc-2.11.3.so*** glibc detected *** ./wrf.exe: free(): invalid next size (fast): 0x00000000137cb810 ***
======= Backtrace: =========
/lib64/libc.so.6(+0x733b6)[0x2abf351843b6]
/lib64/libc.so.6(cfree+0x6c)[0x2abf351892dc]
/usr/local/pgi/linux86-64/11.7/libso/libpgf90.so(pgf90_auto_dealloc+0xd)[0x2abf3465439d]
./wrf.exe[0x148892b]
======= Memory map: ========
00400000-02057000 r-xp 00000000 08:21 90351700 /praktikum/sany/Build_WRF/WRFV35/WRFV3/main /wrf.exe
02256000-02258000 r-xp 01c56000 08:21 90351700 /praktikum/sany/Build_WRF/WRFV35/WRFV3/main /wrf.exe
02258000-024be000 rwxp 01c58000 08:21 90351700 /praktikum/sany/Build_WRF/WRFV35/WRFV3/main /wrf.exe
024be000-163f8000 rwxp 00000000 00:00 0 [heap]
2abf3362e000-2abf3364c000 r-xp 00000000 08:02 3410130 /lib64/ld-2.11.3.so
2abf3364c000-2abf3364e000 rwxp 00000000 00:00 0
2abf3384b000-2abf3384c000 r-xp 0001d000 08:02 3410130 /lib64/ld-2.11.3.so
2abf3384c000-2abf3384d000 rwxp 0001e000 08:02 3410130 /lib64/ld-2.11.3.so
2abf3384d000-2abf3384e000 rwxp 00000000 00:00 0
2abf3384e000-2abf33899000 r-xp 00000000 08:02 4721207 /usr/local/netcdf-4.1.3/lib/libnetcdff.so.5 .1.0
2abf33899000-2abf33a98000 ---p 0004b000 08:02 4721207 /usr/local/netcdf-4.1.3/lib/libnetcdff.so.5 .1.0
2abf33a98000-2abf33a99000 r-xp 0004a000 08:02 4721207 /usr/local/netcdf-4.1.3/lib/libnetcdff.so.5 .1.0
2abf33a99000-2abf33a9b000 rwxp 0004b000 08:02 4721207 /usr/local/netcdf-4.1.3/lib/libnetcdff.so.5 .1.0
2abf33a9b000-2abf33c36000 rwxp 00000000 00:00 0
2abf33c36000-2abf33cc9000 r-xp 00000000 08:02 4721199 /usr/local/netcdf-4.1.3/lib/libnetcdf.so.7. 1.1
2abf33cc9000-2abf33ec9000 ---p 00093000 08:02 4721199 /usr/local/netcdf-4.1.3/lib/libnetcdf.so.7. 1.1
2abf33ec9000-2abf33f16000 r-xp 00093000 08:02 4721199 /usr/local/netcdf-4.1.3/lib/libnetcdf.so.7. 1.1
2abf33f16000-2abf33f17000 rwxp 000e0000 08:02 4721199 /usr/local/netcdf-4.1.3/lib/libnetcdf.so.7. 1.1
2abf33f17000-2abf33f1b000 rwxp 00000000 00:00 0
2abf33f37000-2abf33f3f000 r-xp 00000000 08:02 3410250 /lib64/librt-2.11.3.so
2abf33f3f000-2abf3413e000 ---p 00008000 08:02 3410250 /lib64/librt-2.11.3.so
2abf3413e000-2abf3413f000 r-xp 00007000 08:02 3410250 /lib64/librt-2.11.3.so
2abf3413f000-2abf34140000 rwxp 00008000 08:02 3410250 /lib64/librt-2.11.3.so
2abf34140000-2abf34141000 rwxp 00000000 00:00 0
2abf34141000-2abf34158000 r-xp 00000000 08:02 3410245 /lib64/libpthread-2.11.3.so
2abf34158000-2abf34358000 ---p 00017000 08:02 3410245 /lib64/libpthread-2.11.3.so
2abf34358000-2abf34359000 r-xp 00017000 08:02 3410245 /lib64/libpthread-2.11.3.so
2abf34359000-2abf3435a000 rwxp 00018000 08:02 3410245 /lib64/libpthread-2.11.3.so
2abf3435a000-2abf3435e000 rwxp 00000000 00:00 0
2abf3435e000-2abf34375000 r-xp 00000000 08:02 2895303 /usr/local/pgi/linux86-64/11.7/libso/libpgm p.so
2abf34375000-2abf34475000 ---p 00017000 08:02 2895303 /usr/local/pgi/linux86-64/11.7/libso/libpgm p.so
2abf34475000-2abf344b6000 rwxp 00017000 08:02 2895303 /usr/local/pgi/linux86-64/11.7/libso/libpgm p.so
64/11.7/libso/libpgf 90rtl.so
2abf34c29000-2abf34c2b000 rwxp 0002c000 08:02 2895297 /usr/local/pgi/linux86-64/11.7/libso/libpgf 90rtl.so
2abf34c2b000-2abf34c2c000 rwxp 00000000 00:00 0
2abf34c2c000-2abf34c57000 r-xp 00000000 08:02 2895298 /usr/local/pgi/linux86-64/11.7/libso/libpgf tnrtl.so
2abf34c57000-2abf34d57000 ---p 0002b000 08:02 2895298 /usr/local/pgi/linux86-64/11.7/libso/libpgf tnrtl.so
2abf34d57000-2abf34d59000 rwxp 0002b000 08:02 2895298 /usr/local/pgi/linux86-64/11.7/libso/libpgf tnrtl.so
2abf34d59000-2abf34d5b000 rwxp 00000000 00:00 0
2abf34d5b000-2abf34dae000 r-xp 00000000 08:02 2895306 /usr/local/pgi/linux86-64/11.7/libso/libpgc .so
2abf34dae000-2abf34ead000 ---p 00053000 08:02 2895306 /usr/local/pgi/linux86-64/11.7/libso/libpgc .so
2abf34ead000-2abf34eb6000 rwxp 00052000 08:02 2895306 /usr/local/pgi/linux86-64/11.7/libso/libpgc .so
2abf34eb6000-2abf34eb9000 rwxp 00000000 00:00 0
2abf34eb9000-2abf34f0f000 r-xp 00000000 08:02 3410140 /lib64/libm-2.11.3.so
2abf34f0f000-2abf3510e000 ---p 00056000 08:02 3410140 /lib64/libm-2.11.3.so
2abf3510e000-2abf3510f000 r-xp 00055000 08:02 3410140 /lib64/libm-2.11.3.so
2abf3510f000-2abf35110000 rwxp 00056000 08:02 3410140 /lib64/libm-2.11.3.so
2abf35110000-2abf35111000 rwxp 00000000 00:00 0
2abf35111000-2abf35275000 r-xp 00000000 08:02 3410113 /lib64/libc-2.11.3.so
2abf35275000-2abf35474000 ---p 00164000 08:02 3410113 /lib64/libc-2.11.3.so
2abf35474000-2abf35478000 r-xp 00163000 08:02 3410113 /lib64/libc-2.11.3.so
=====================================================================================
= BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES
= EXIT CODE: 6
= CLEANING UP REMAINING PROCESSES
= YOU CAN IGNORE THE BELOW CLEANUP MESSAGES
=====================================================================================
APPLICATION TERMINATED WITH THE EXIT STRING: Aborted (signal 6)


here the namelist.input,

&time_control
run_days = 10,
run_hours = 0,
run_minutes = 0,
run_seconds = 0,
start_year = 2015, 2015, 2000,
start_month = 10, 10, 01,
start_day = 01, 01, 24,
start_hour = 00, 00, 12,
start_minute = 00, 00, 00,
start_second = 00, 00, 00,
end_year = 2015, 2015, 2000,
end_month = 10, 10, 01,
end_day = 11, 11, 25,
end_hour = 00, 00, 12,
end_minute = 00, 00, 00,
end_second = 00, 00, 00,
interval_seconds = 21600,
input_from_file = .true.,.true.,.false.,
history_interval = 60, 60, 60,
frames_per_outfile = 1000, 1000, 1000,
restart = .false.,
restart_interval = 0,
io_form_history = 2,
io_form_restart = 2,
io_form_input = 2,
io_form_boundary = 2,
auxinput6_inname = 'wrfbiochemi_d01',
auxinput7_inname = 'wrffirechemi_d<domain>',
auxinput8_inname = 'wrfchemi_gocart_bg_d<domain>',
auxinput12_inname = 'wrf_chem_input',
auxinput13_inname = 'wrfchemv_d<domain>',
auxinput5_interval_m = 1440, 1440, 60,
auxinput7_interval_m = 1440, 1440, 60,
auxinput8_interval_m = 1440, 1440, 60,
auxinput13_interval_m = 1440, 1440, 60,
io_form_auxinput2 = 2,
io_form_auxinput5 = 2,
io_form_auxinput6 = 0,
io_form_auxinput7 = 2,
io_form_auxinput8 = 2,
io_form_auxinput12 = 0,
io_form_auxinput13 = 0,
debug_level = 0,
auxinput1_inname = "met_em.d<domain>.<date>",
/

&dfi_control
/

&domains
time_step = 60,
time_step_fract_num = 0,
time_step_fract_den = 1,
max_dom = 1,
s_we = 1, 1, 1,
e_we = 118, 161, 94,
s_sn = 1, 1, 1,
e_sn = 118, 146, 91,
e_vert = 30, 30, 28,
num_metgrid_levels = 27,
num_metgrid_soil_levels = 4,
dx = 10000, 2000, 3333.33,
dy = 10000, 2000, 3333.33,
grid_id = 1, 2, 3,
parent_id = 0, 1, 2,
i_parent_start = 1, 49, 30,
j_parent_start = 1, 57, 30,
parent_grid_ratio = 1, 5, 3,
parent_time_step_ratio = 1, 3, 3,
p_top_requested = 5000,
feedback = 1,
smooth_option = 0
zap_close_levels = 50
interp_type = 1
t_extrap_type = 2
force_sfc_in_vinterp = 0
use_levels_below_ground = .true.
use_surface = .true.
lagrange_order = 1
/
sfcp_to_sfcp = .true.

&physics
mp_physics = 2, 2, 2,
progn = 0,
ra_lw_physics = 1, 1, 1,
ra_sw_physics = 2, 2, 1,
radt = 30, 30, 30,
sf_sfclay_physics = 2, 2, 1,
sf_surface_physics = 2, 2, 1,
bl_pbl_physics = 2, 2, 1,
bldt = 0, 0, 0,
cu_physics = 5, 0, 0,
cu_diag = 1, 0, 0,
cudt = 0, 0, 0,
ishallow = 0,
isfflx = 1,
ifsnow = 1,
icloud = 1,
surface_input_source = 1,
num_soil_layers = 4,
sf_urban_physics = 0, 0, 0,
mp_zero_out = 2,
mp_zero_out_thresh = 1.e-12
maxiens = 1,
maxens = 3,
maxens2 = 3,
maxens3 = 16,
ensdim = 144,
cu_rad_feedback = .true.,
/
&fdda
/

&dynamics
rk_ord = 3,
w_damping = 1,
diff_opt = 1,
km_opt = 4,
diff_6th_opt = 0,
diff_6th_factor = 0.12,
base_temp = 290.,
damp_opt = 0,
zdamp = 5000., 5000., 5000.,
dampcoef = 0.01, 0.01, 0.01
khdif = 0, 0, 0,
kvdif = 0, 0, 0,
non_hydrostatic = .true., .true., .true.,
moist_adv_opt = 2, 2, 0,
scalar_adv_opt = 2, 2, 0,
chem_adv_opt = 2, 2, 0,
tke_adv_opt = 2, 2, 0,
time_step_sound = 4, 4, 4,
h_mom_adv_order = 5, 5, 5,
v_mom_adv_order = 3, 3, 3,
h_sca_adv_order = 5, 5, 5,
v_sca_adv_order = 3, 3, 3,
/

&bdy_control
spec_bdy_width = 5,
spec_zone = 1,
relax_zone = 4,
specified = .true., .false.,.false.,
nested = .false.,.true.,.false.,
/

&grib2
/

&namelist_quilt
nio_tasks_per_group = 0,
nio_groups = 1,
/
&chem
kemit = 1,
chem_opt = 301,
bioemdt = 30,
photdt = 30,
chemdt = 10,
io_style_emissions = 2,
emiss_opt = 5, 0,
emiss_opt_vol = 0, 0,
emiss_ash_hgt = 20000.,
emiss_inpt_opt = 1,
chem_in_opt = 0, 0,
phot_opt = 1, 0,
gas_drydep_opt = 1, 1,
aer_drydep_opt = 1, 1,
bio_emiss_opt = 1, 0,
ne_area = 1,
depo_fact = 0.25,
dust_opt = 1,
dmsemis_opt = 1,
seas_opt = 1,
gas_bc_opt = 1, 0,
gas_ic_opt = 1, 0,
aer_bc_opt = 1, 0,
aer_ic_opt = 1, 0,
gaschem_onoff = 1, 0,
aerchem_onoff = 1, 0,
wetscav_onoff = 0, 0,
cldchem_onoff = 0, 0,
vertmix_onoff = 1, 0,
chem_conv_tr = 1, 0,
conv_tr_wetscav = 0, 0,
conv_tr_aqchem = 0, 0,
biomass_burn_opt = 1, 0,
plumerisefire_frq = 120, 0,
have_bcs_chem = .false., .false., .false.,
aer_ra_feedback = 1,
aer_op_opt = 0,
opt_pars_out = 0,
diagnostic_chem = 0,
/



any suggestion?
thanks for your attention
sany.indra
 
Posts: 1
Joined: Wed Aug 09, 2017 12:54 am

Re: WRF/Chem Runtime Error

Postby dingwell » Thu Dec 07, 2017 10:44 am

Hi,

did you (or anyone else) find a solution to this problem?

I am trying to run a basic dust simulation and get the same error message (different memory address):

Interestingly, if I run real.exe in MPI-mode the code hangs during an MPI-gather; if I run in serial, real.exe finishes and output data looks correct. I am unable to test wrf-chem in serial mode (due to memory allocation restrictions) but it might be related.

Furthermore, I tried updating from WRF-Chem 3.9 to WRF-Chem 3.9.1. This removed the "invalid next size"-error but I now get a segmentation fault instead. (I see you are on 3.5, so I guess we are probably just getting the same message but it's likely caused by different problems...)

Similar problems reported (still no solutions):
http://forum.wrfforum.com/viewtopic.php?f=28&t=580 (WRFVAR: 2008)
http://mailman.ucar.edu/pipermail/wrf-users/2011/002072.html (real.exe: 2011)

Possibly related(?):
http://forum.wrfforum.com/viewtopic.php?f=6&t=104 (wrf.exe using wrfvar: 2008)
This might be similar to your error, since PREP-CHEM_SOURCES (like WRFVAR) is distributed separately. Maybe the model and the emission pre-processor expect different length of some array, resulting in a bad array index when running WRF-Chem?
dingwell
 
Posts: 9
Joined: Mon Jan 30, 2012 6:10 am

Re: WRF/Chem Runtime Error

Postby kwthomas » Mon Dec 11, 2017 4:30 pm

Based on your text, it sounds like you are using Intel 17.0.4. That compiler generates bad
optimized code for WRF software.

I had to build "real.exe" with -O0 to get MPI to work. I know that -O2 and -O3 hang or seg
fault. I didn't try -O1.

Build WRF/Chem with -O2 instead of -O3 and see if it fixes things.
Kevin W. Thomas
Center for Analysis and Prediction of Storms
University of Oklahoma
kwthomas
 
Posts: 208
Joined: Thu Aug 07, 2008 6:53 pm


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